Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29848.m004600 |
Family | GT47 |
Protein Properties | Length: 474 Molecular Weight: 55038.4 Isoelectric Point: 9.2265 |
Chromosome | Chromosome/Scaffold: 29848 Start: 905690 End: 908624 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 138 | 421 | 0 |
EKRFKVWTYKEGEPPLFHNGPMKEIYSTEGQFIDEFESGKSLFSARRPDEAHAFFLPVSIVSIVKYVYRPYSDYSRIRLQNVVKDYVGVISSKYPFWNRS DGADHFLTSCHDWAPDVSAGHPELYKYFTRVLCNANTSEGFVPERDVSLPEIRLRDRKLSPEPHSLPPKDRRILAFFAGGEHGHVRTKLFEHWKGKDRDV QVYEYLPKTLNYTELMSHSKFCLCPSGWEVASPRVPEAIYSGCVPVIISDYYYLPFSDVLDWSKFSVHIPVARIPEIKTVLQKI |
Full Sequence |
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Protein Sequence Length: 474 Download |
MHCLLLHAHL NMADFTCTAS CILYPSILII LFFSSINHQH HSFTNLSFSL LNHTTITSQE 60 NQQVIIPPIS NISRANATNV QMKSPLQEME EGLARARAAI LEAGRTRNYS SHKQESFIPR 120 GSIYLNPYIF HQSYIEMEKR FKVWTYKEGE PPLFHNGPMK EIYSTEGQFI DEFESGKSLF 180 SARRPDEAHA FFLPVSIVSI VKYVYRPYSD YSRIRLQNVV KDYVGVISSK YPFWNRSDGA 240 DHFLTSCHDW APDVSAGHPE LYKYFTRVLC NANTSEGFVP ERDVSLPEIR LRDRKLSPEP 300 HSLPPKDRRI LAFFAGGEHG HVRTKLFEHW KGKDRDVQVY EYLPKTLNYT ELMSHSKFCL 360 CPSGWEVASP RVPEAIYSGC VPVIISDYYY LPFSDVLDWS KFSVHIPVAR IPEIKTVLQK 420 IPMRKYLTMQ KRVIQVQRHF KLNRPAKPYD VLHMVLHSIW LRRLNVRLNA MLPI 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-66 | 137 | 421 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21065.1 | 0 | 79 | 468 | 8 | 400 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25529.1 | 0 | 84 | 470 | 2 | 388 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q9LFP3 | 0 | 12 | 468 | 1 | 476 | GLYT4_ARATH RecName: Full=Probable glycosyltransferase At5g11130 |
RefSeq | XP_002324873.1 | 0 | 137 | 468 | 1 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515488.1 | 0 | 1 | 474 | 1 | 474 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EC939466 | 295 | 80 | 369 | 0 |
FD507587 | 228 | 180 | 407 | 0 |
GO363500 | 277 | 168 | 442 | 0 |
GE475605 | 298 | 175 | 468 | 0 |
FE523338 | 303 | 112 | 410 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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