| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29848.m004617 |
| Family | CBM57 |
| Protein Properties | Length: 895 Molecular Weight: 98735.2 Isoelectric Point: 6.0351 |
| Chromosome | Chromosome/Scaffold: 29848 Start: 985107 End: 992925 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 650 | 833 | 2.1e-29 |
| SIKCGGTSQTSASGVEYDDDSELLGAASLHTSSDSMWAVSNVGNFISNPAPTYIKQTDSQIAETLESELYKTARISASSLRYYGLGLKNGRYSIELHFAE IGMDDVSQSWKGLGRRIFDVYIQGGRVLQDFNLQNEAGGSKRALVKTFEANVTNSIMDIHFFWAGKGTCCIPQQSTYGPLVSAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 895 Download |
| MELQLGLSLS TNNFESKGMM GFKLWRNDEC LLDKKKRSFE DAFVKNTNYN KGKETSLPLL 60 SWSGQPNDED DDEQRKRKRL SCPIDENDGV VAEEEEQVVG WPPIKSWRKK LLHDQQHGGR 120 PTVKNRVAAA ASAGNENNQM NGGSNYKYVK VKMEGVAIAR KIDLRLFHSY QTLTNFLISM 180 FGKCEKGDDD STTNYTLTYQ DKDGDWLLAG DVPWQTFMES VQRLELVRNG GLPRPSLCKF 240 PCFLMEVLSC SFFLVLVLLQ VVSAQPATDS NEVAALDKMI DYWNLRSKLN ITNDPCIQNA 300 TWANENANPR VACDCTGSIC HITHLKIYAL DIVGEIPSEL FVLQKLMDLN LGQNVLNGSI 360 PPEIGQLSNM QYLSLGINNL TGQVPPELGN LTKLLSLSFS SNNFFGPLPT ELGNLTSLQQ 420 LYIDSSGVSG SIPQEVKQLK SLQILWASDN RFTGKLPEFF GALTALKVLR LQGTLLEGPI 480 PSSFSALNNL EDLRIGDLNG EDSSLEFLKD QRNLSVLILR NCLISGEIPE RLGTFTKLKQ 540 LDLSFNKLTG QIPTSFQDLA SLQFLYLGSN TLSGELPANI IGPQLIALDV SFNPLSGNLP 600 QNFAKAGSSM LVVGTSINAN GLQESKVSGM LRCLQADLKC SNKVPSYSFS IKCGGTSQTS 660 ASGVEYDDDS ELLGAASLHT SSDSMWAVSN VGNFISNPAP TYIKQTDSQI AETLESELYK 720 TARISASSLR YYGLGLKNGR YSIELHFAEI GMDDVSQSWK GLGRRIFDVY IQGGRVLQDF 780 NLQNEAGGSK RALVKTFEAN VTNSIMDIHF FWAGKGTCCI PQQSTYGPLV SAIHVSQVSD 840 STDSSNRDKK HVGKLVGIAV GCATGLVIIS SVFYIWWTKD STRHLQIQRD PLKKY 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 7.0e-36 | 325 | 653 | 338 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 9.0e-40 | 316 | 623 | 314 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 5.0e-40 | 332 | 599 | 271 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 6.0e-46 | 317 | 603 | 293 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 2.0e-52 | 647 | 833 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0005634 | nucleus |
| GO:0006355 | regulation of transcription, DNA-dependent |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21051.1 | 0 | 245 | 854 | 1 | 609 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282711.1 | 0 | 235 | 854 | 147 | 751 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309634.1 | 0 | 260 | 837 | 15 | 465 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002324865.1 | 0 | 245 | 857 | 1 | 556 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515504.1 | 0 | 1 | 895 | 1 | 895 | ATP binding protein, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 3e-22 | 317 | 632 | 217 | 557 | A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine |
| PDB | 3rj0_A | 3e-21 | 317 | 601 | 436 | 719 | A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine |
| PDB | 3rj0_A | 2e-18 | 316 | 601 | 328 | 695 | A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine |
| PDB | 3riz_A | 3e-22 | 317 | 632 | 217 | 557 | A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain |
| PDB | 3riz_A | 3e-21 | 317 | 601 | 436 | 719 | A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain |
