y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29889.m003265 |
Family | GH3 |
Protein Properties | Length: 782 Molecular Weight: 84984 Isoelectric Point: 8.1797 |
Chromosome | Chromosome/Scaffold: 29889 Start: 117318 End: 121866 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 88 | 335 | 0 |
AAVPRLGIQGYEWWSEALHGVSNVGPGVKFGGAFPGATSFPQVITTAASFNQSLWEQIGRVVSDEARAMYNGGLAGLTYWSPNVNVFRDPRWGRGQETPG EDPVLAGKYAASYVRGLQSSTGLKLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYDVPFKACVVEGKVASVMCSYNQVNGKPTCADPILLKN TIRGQWGLNGYIVSDCDSVGVLYDNQHYTSTPEEAAAATIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 782 Download |
MANNKNHILP TFPPLLIIMF FFFFFFFLSS LPIHLVESRA PFACDPRNGV TRNLKFCRAN 60 LPIHVRVRDL ISRLTLQEKI RLLVNNAAAV PRLGIQGYEW WSEALHGVSN VGPGVKFGGA 120 FPGATSFPQV ITTAASFNQS LWEQIGRVVS DEARAMYNGG LAGLTYWSPN VNVFRDPRWG 180 RGQETPGEDP VLAGKYAASY VRGLQSSTGL KLKVAACCKH YTAYDLDNWN GVDRYHFNAR 240 VSKQDLEDTY DVPFKACVVE GKVASVMCSY NQVNGKPTCA DPILLKNTIR GQWGLNGYIV 300 SDCDSVGVLY DNQHYTSTPE EAAAATIKAG LDLDCGPFLA IHTENAVKKG LLVEEDVNLA 360 LANTITVQMR LGMFDGEPSA HPYGNLGPRD VCTPAHQELA LEAARQGIVL LENRGQALPL 420 SSSRHHTIAV IGPNSDVTVT MIGNYAGIAC KYTSPLQGIS RYAKTLHQNG CGDVACHSNQ 480 QFGAAEAAAR QADATVLVMG LDQSIEAEFR DRVGLLLPGH QQELVSRVAR ASRGPTILVL 540 MSGGPIDVSF AKNDPRVGAI LWAGYPGQAG GAAIADVLFG TTNPGGKLPM TWYPQGYLAK 600 VPMTNMGMRP DPATGYPGRT YRFYKGNVVF PFGHGMSYTS FSHSLTQAPK EVSLPITNLY 660 ALNTTISSKA IRVSHINCQT SLGIDINVKN TGTMDGTHTL LVFSSPPSGE KESSNKQLIG 720 FEKVDLVAGS QIQVKIDIHV CKHLSAVDRF GIRRIPIGDH HIYIGDLKHS ISLQANMEEA 780 KH 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-55 | 408 | 639 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-61 | 85 | 471 | 393 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-64 | 78 | 367 | 294 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-73 | 125 | 738 | 662 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 56 | 775 | 743 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 125 | 738 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3u48_A | 0 | 125 | 738 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3u4a_B | 0 | 125 | 738 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3u4a_A | 0 | 125 | 738 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 2x41_A | 0 | 66 | 777 | 3 | 711 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |