| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29904.m002899 |
| Family | GH35 |
| Protein Properties | Length: 897 Molecular Weight: 100729 Isoelectric Point: 6.4384 |
| Chromosome | Chromosome/Scaffold: 29904 Start: 85454 End: 96732 |
| Description | beta galactosidase 9 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 47 | 350 | 0 |
| LIIDGHRRMLISGGIHYPRATPQMWPDLIAKSKEGGVDVIQTYVFWNGHEPVKGQYIFEGQYDLVKFVKLVGVSGLYLHLRIGPYVCAEWNFGGFPVWLR DIPGIVFRTDNSPFMEEMQQFVKKIVDLMREEMLFSWQGGPIIMLQIENEYGNIEHSFGPGGKEYVKWAARMALGLGAGVPWVMCRQTDAPGSIIDACNE YYCDGYKPNSNKKPILWTEDWDGWYTTWGGSLPHRPVEDLAFAVARFFQRGGSFQNYYMYFGGTNFARTAGGPFYITSYDYDAPIDEYGLLSEPKWGHLK DLHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 897 Download |
| MTASRRRREA EPLVPCLCLL LILVIIVDNV SANFFKPFNV SYDHRALIID GHRRMLISGG 60 IHYPRATPQM WPDLIAKSKE GGVDVIQTYV FWNGHEPVKG QYIFEGQYDL VKFVKLVGVS 120 GLYLHLRIGP YVCAEWNFGG FPVWLRDIPG IVFRTDNSPF MEEMQQFVKK IVDLMREEML 180 FSWQGGPIIM LQIENEYGNI EHSFGPGGKE YVKWAARMAL GLGAGVPWVM CRQTDAPGSI 240 IDACNEYYCD GYKPNSNKKP ILWTEDWDGW YTTWGGSLPH RPVEDLAFAV ARFFQRGGSF 300 QNYYMYFGGT NFARTAGGPF YITSYDYDAP IDEYGLLSEP KWGHLKDLHA AIKLCEPALV 360 AADSAQYIKL GSKQEAHVYR ANVHAEGQNL TQHGSQSKCS AFLANIDEHK AVTVRFLGQS 420 YTLPPWSVSV LPDCRNAVFN TAKVAAQTSI KSMELALPQF SGISAPKQLM AQNEGSYMSS 480 SWMTVKEPIS VWSGNNFTVE GILEHLNVTK DHSDYLWYFT RIYVSDDDIA FWEENNVHPA 540 IKIDSMRDVL RVFINGQLTG SVIGRWIKVV QPVQFQKGYN ELVLLSQTVG LQNYGAFLER 600 DGAGFRGHTK LTGFRDGDID LSNLEWTYQV GLQGENQKIY TTENNEKAEW TDLTLDDIPS 660 TFTWYKTYFD APSGADPVAL DLGSMGKGQA WVNDHHIGRY WTLVAPEEGC QKCDYRGAYN 720 SEKCRTNCGK PTQIWYHIPR SWLQPSNNLL VIFEETGGNP FEISIKLRSA SVVCAQVSET 780 HYPPLQRWIH TDFIYGNVSG KDMTPEIQLR CQDGYVISSI EFASYGTPQG SCQKFSRGNC 840 HAPNSLSVVS KACQGRDTCN IAISNAVFGG DPCRGIVKTL AVEAKCSLSS SVGFAQH 900 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02449 | Glyco_hydro_42 | 5.0e-6 | 62 | 198 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| COG1874 | LacA | 1.0e-20 | 40 | 201 | 172 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam02140 | Gal_Lectin | 1.0e-26 | 809 | 886 | 82 | + Galactose binding lectin domain. |
| pfam01301 | Glyco_hydro_35 | 1.0e-156 | 46 | 352 | 322 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 39 | 887 | 854 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD91079.1 | 0 | 18 | 893 | 13 | 891 | beta-D-galactosidase [Pyrus pyrifolia] |
| DDBJ | BAE72075.1 | 0 | 18 | 896 | 13 | 893 | pear beta-galactosidase3 [Pyrus communis] |
| RefSeq | XP_002263385.1 | 0 | 17 | 896 | 12 | 881 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
| RefSeq | XP_002328900.1 | 0 | 19 | 897 | 15 | 891 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518051.1 | 0 | 1 | 897 | 1 | 897 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1.99993e-41 | 46 | 348 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 8.99998e-41 | 38 | 339 | 9 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 8.99998e-41 | 38 | 339 | 9 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 8.99998e-41 | 38 | 339 | 9 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
