Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29904.m002954 |
Family | CE8 |
Protein Properties | Length: 336 Molecular Weight: 38034.2 Isoelectric Point: 9.3687 |
Chromosome | Chromosome/Scaffold: 29904 Start: 443076 End: 444780 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 48 | 326 | 0 |
VLVDQSGHGNFSTVQSAIDSVPSNNKNWICIYIKAGIYREKVKIPYDRPYIILKGEAKRRTQIIWDDHDSTAQSPTFMSLADNIIVKSIRFVNSYNFLNS NNPRVPAVAAMIAGDKSAFYRCGFAGVQDTLWDDQGRHYFKKCTIQGAVDFIFGSGQSIYEGCAIQVIGDGFITAQGRTNPSDANGFVFKRCNVFGRGSA YLGRPWRGYSRVLFYQSNFTNVIHPEGWNAWDFVHHENQITFAEYGNFGPGADTKNRVSWAKKLSHQTLCKLVSMSFID |
Full Sequence |
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Protein Sequence Length: 336 Download |
MKKLLQWCSC FYLALWIGIT QLGLMANGKL HASGKWYSNN KKFPYVSVLV DQSGHGNFST 60 VQSAIDSVPS NNKNWICIYI KAGIYREKVK IPYDRPYIIL KGEAKRRTQI IWDDHDSTAQ 120 SPTFMSLADN IIVKSIRFVN SYNFLNSNNP RVPAVAAMIA GDKSAFYRCG FAGVQDTLWD 180 DQGRHYFKKC TIQGAVDFIF GSGQSIYEGC AIQVIGDGFI TAQGRTNPSD ANGFVFKRCN 240 VFGRGSAYLG RPWRGYSRVL FYQSNFTNVI HPEGWNAWDF VHHENQITFA EYGNFGPGAD 300 TKNRVSWAKK LSHQTLCKLV SMSFIDTENW IQDQPL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 1.0e-83 | 50 | 331 | 289 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 3.0e-88 | 47 | 331 | 292 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 5.0e-91 | 44 | 332 | 291 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 4.0e-106 | 31 | 336 | 315 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 0 | 1 | 336 | 345 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 48 | 332 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-40 | 49 | 307 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 2e-16 | 15 | 253 | 13 | 269 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000000005 | 45 | 253 | 4 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000000005 | 45 | 253 | 4 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |