| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29908.m005997 |
| Family | GH3 |
| Protein Properties | Length: 246 Molecular Weight: 27468.3 Isoelectric Point: 9.398 |
| Chromosome | Chromosome/Scaffold: 29908 Start: 945389 End: 946215 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 78 | 244 | 2.49992e-42 |
| SIPRLGVPAYRWWSEALHGVAFLPDVSERQGIHFNGTIRSATSFPQVIITAASFDTKLWYRIGQVTGKEARAIYNAGQAIGMTFWAPNINIFRDPRWGRG QETPGEDPMVTGKYAVSFVRGVQGDSFEGGVLGEKLQASACCKHFTAYDLEKWNGTNRFIFNAQVSA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 246 Download |
| MKLRKISLLT LFHLTSFLIF IFADSAPQPP FSCDYSNPST KSYLFCQTSL PISQRAKDLV 60 SRLTLDEKIS QLVDTAPSIP RLGVPAYRWW SEALHGVAFL PDVSERQGIH FNGTIRSATS 120 FPQVIITAAS FDTKLWYRIG QVTGKEARAI YNAGQAIGMT FWAPNINIFR DPRWGRGQET 180 PGEDPMVTGK YAVSFVRGVQ GDSFEGGVLG EKLQASACCK HFTAYDLEKW NGTNRFIFNA 240 QVSARQ 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK15098 | PRK15098 | 4.0e-17 | 36 | 225 | 231 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 2.0e-23 | 76 | 225 | 151 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 5.0e-33 | 64 | 245 | 208 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PLN03080 | PLN03080 | 9.0e-98 | 23 | 245 | 227 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002302284.1 | 0 | 5 | 241 | 9 | 240 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002302285.1 | 0 | 28 | 245 | 25 | 237 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306583.1 | 0 | 9 | 245 | 6 | 237 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513887.1 | 0 | 1 | 246 | 1 | 246 | hypothetical protein RCOM_1034150 [Ricinus communis] |
| RefSeq | XP_002513892.1 | 0 | 1 | 245 | 1 | 238 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4i3g_B | 6e-18 | 53 | 242 | 51 | 214 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4i3g_A | 6e-18 | 53 | 242 | 51 | 214 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 2x42_A | 6e-16 | 54 | 245 | 2 | 184 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
| PDB | 2x41_A | 6e-16 | 54 | 245 | 2 | 184 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
| PDB | 2x40_A | 6e-16 | 54 | 245 | 2 | 184 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol |
