| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29912.m005323 |
| Family | GH35 |
| Protein Properties | Length: 840 Molecular Weight: 92766.3 Isoelectric Point: 7.341 |
| Chromosome | Chromosome/Scaffold: 29912 Start: 316837 End: 322080 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 38 | 340 | 0 |
| TINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFPVWLKY VPGIEFRTDNGPFKAAMQKFTEKIVSMMKSEKLFESQGGPIILSQIENEFGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWVMCKQDDAPDPVINTCNGF YCENFKPNKDYKPKLWTENWTGWYTEFGGAVPYRPAEDLAFSVARFIQNGGSFMNYYMYHGGTNFGRTSAGLFIATSYDYDAPLDEYGLTRDPKWGHLRD LHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 840 Download |
| MLKGSNTVFL FLFLLFLLSS SWVCSILATV SYDHRAITIN GQRRILISGS IHYPRSTPEM 60 WPDLIQKAKD GGLDVIQTYV FWNGHEPSPG NYYFEDRYDL VKFIKVVQAA GLYVHLRIGP 120 YICAEWNFGG FPVWLKYVPG IEFRTDNGPF KAAMQKFTEK IVSMMKSEKL FESQGGPIIL 180 SQIENEFGPV EWEIGAPGKA YTKWAADMAV KLGTGVPWVM CKQDDAPDPV INTCNGFYCE 240 NFKPNKDYKP KLWTENWTGW YTEFGGAVPY RPAEDLAFSV ARFIQNGGSF MNYYMYHGGT 300 NFGRTSAGLF IATSYDYDAP LDEYGLTRDP KWGHLRDLHK AIKLCEPALV SVDPTVKSLG 360 SNQEAHVFQS KSSCAAFLAN YDTKYSVKVT FGNGQYDLPP WSISILPDCK TAVFNTARLG 420 AQSSQMKMTP VGGALSWQSY IEEAATGYTD DTTTLEGLWE QINVTRDASD YLWYMTNVNI 480 DSDEGFLKNG DSPVLTIFSA GHSLHVFING QLAGTVYGSL ENPKLTFSQN VKLTAGINKI 540 SLLSVAVGLP NVGVHFEKWN AGILGPVTLK GLNEGTRDLS GWKWSYKIGL KGEALSLHTV 600 TGSSSVEWVE GSLSAKKQPL TWYKATFDAP EGNDPVALDM SSMGKGQIWV NGQSIGRHWP 660 AYTARGSCSA CNYAGTYDDK KCRSNCGEPS QRWYHVPRSW LNPSGNLLVV FEEWGGEPSG 720 ISLVKRTTGS VCADIFEGQP ALKNWQMIAL GRLDHLQPKA HLWCPHGQKI SKIKFASYGS 780 PQGTCGSFKA GSCHAHKSYD AFEKKCIGKQ SCSVTVAAEV FGGDPCPDSS KKLSVEAVCT 840 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02449 | Glyco_hydro_42 | 0.0003 | 52 | 188 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| COG1874 | LacA | 2.0e-22 | 30 | 332 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam02140 | Gal_Lectin | 3.0e-23 | 762 | 839 | 82 | + Galactose binding lectin domain. |
| pfam01301 | Glyco_hydro_35 | 3.0e-164 | 36 | 342 | 322 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 1 | 840 | 840 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV32546.1 | 0 | 28 | 840 | 26 | 836 | beta-galactosidase protein 1 [Prunus persica] |
| GenBank | ABY71826.1 | 0 | 1 | 840 | 4 | 836 | beta-galactosidase [Prunus salicina] |
| EMBL | CBI27912.1 | 0 | 1 | 840 | 1 | 833 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002308268.1 | 0 | 20 | 840 | 18 | 838 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514108.1 | 0 | 1 | 840 | 1 | 840 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2.94273e-44 | 28 | 338 | 6 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.006 | 494 | 659 | 399 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-37 | 30 | 325 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-37 | 30 | 325 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
