Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29912.m005324 |
Family | GH35 |
Protein Properties | Length: 827 Molecular Weight: 92206.2 Isoelectric Point: 8.6233 |
Chromosome | Chromosome/Scaffold: 29912 Start: 324956 End: 329878 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 334 | 0 |
TINNQRRILISGSIHYPRSTPEMWPGLIQKAKEGGIEVIQTYVFWNGHEPSPGQYYFQDRYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPMWLKY VPGIEFRTDNGPFKAAMQKFVTLIVNMMKEQKLFQTQGGPIILSQIENEYGPVEWTIGAPGKAYTKWAAAMATGLNTGVPWIMCKQEDAPDPTIDTCNGF YCEGYKPNNYNKPKVWTENWTGWYTEWGASVPYRPPEDTAFSVARFIAASGSFVNYYMYHGGTNFDRTAGLFMATSYDYDAPLDEYGLTHDPKWGHLRDL HR |
Full Sequence |
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Protein Sequence Length: 827 Download |
MSRGSLFISL LLFVTAWVCN VTATVWYDHK AITINNQRRI LISGSIHYPR STPEMWPGLI 60 QKAKEGGIEV IQTYVFWNGH EPSPGQYYFQ DRYDLVKFIK LVQQAGLYVH LRIGPYVCAE 120 WNFGGFPMWL KYVPGIEFRT DNGPFKAAMQ KFVTLIVNMM KEQKLFQTQG GPIILSQIEN 180 EYGPVEWTIG APGKAYTKWA AAMATGLNTG VPWIMCKQED APDPTIDTCN GFYCEGYKPN 240 NYNKPKVWTE NWTGWYTEWG ASVPYRPPED TAFSVARFIA ASGSFVNYYM YHGGTNFDRT 300 AGLFMATSYD YDAPLDEYGL THDPKWGHLR DLHRAIKQSE RALVSADPTV ISLGKNQEAH 360 VFQSKMGCAA FLANYDTQYS ARVNFWNKPY SLPRWSISVL PDCKTVVYNT AKISAQSTQK 420 WMMPVASGFS WQSHIDEVPV GYSAGTFTKV GLWEQKYLTG DKTDYLWYMT DVTINSNEGF 480 LRSGKNPFLT VASAGHVLHV FINGHLAGSA YGSLENPKLT FSQNVKLVGG VNKIALLSAT 540 VGLANVGVHY DTWNVGVLGP VTLQGLNQGT LDMTKWKWSY KIGLKGEDLK LFSGGANVGW 600 AQGAQLAKKT PLTWYKTFIN APPGNDPVAL YMGSMGKGQM YINGRSIGRH WPAYTAKGNC 660 KDCDYAGYYD DQKCRSGCGQ PPQQWYHVPR SWLKPTGNLL VVFEEMGGDP TGISLVKRVV 720 GSVCADIDDD QPEMKSWTEN IPVTPKAHLW CPPGQKFSKI VFASYGWPQG RCGAYRQGKC 780 HALKSWDPFQ KYCIGKGACD IDVAPATFGG DPCPGSAKRL SVQLQCS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.001 | 47 | 183 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 9.0e-17 | 749 | 826 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 8.0e-18 | 25 | 318 | 320 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-150 | 31 | 336 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 1 | 827 | 840 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32546.1 | 0 | 21 | 827 | 24 | 836 | beta-galactosidase protein 1 [Prunus persica] |
GenBank | ABY71826.1 | 0 | 21 | 827 | 24 | 836 | beta-galactosidase [Prunus salicina] |
RefSeq | XP_002308268.1 | 0 | 18 | 827 | 21 | 838 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514108.1 | 0 | 17 | 827 | 22 | 840 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002514109.1 | 0 | 1 | 827 | 1 | 827 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3e-39 | 34 | 332 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-37 | 27 | 355 | 13 | 353 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-37 | 27 | 355 | 13 | 353 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 1e-37 | 27 | 355 | 13 | 353 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_A | 1e-37 | 27 | 355 | 13 | 353 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |