y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29912.m005334 |
Family | AA7 |
Protein Properties | Length: 529 Molecular Weight: 59640 Isoelectric Point: 7.1579 |
Chromosome | Chromosome/Scaffold: 29912 Start: 402520 End: 405135 |
Description | cytokinin oxidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 61 | 263 | 6.2e-29 |
YGNLVHKKPAAVLYPSSVQDIVSLINFAYNYSAPLTVSARGRSHSINGQAMAPDGVVVDMMHLRSIIEKTNGGVTVSKDPLLGFYADVGGEQLWIDVLNA TIEHGLAPVSWTDYLYLTVGGTLSNAGISGQSFRYGPQISNVYEMDVVTGRGELVTCSGHRNSDLFYAVLGGLGQFGIITRARIALEPAPKKVKWVRMLY SDF |
Full Sequence |
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Protein Sequence Length: 529 Download |
MAENYAFPAY FIVILFITRL VSTVGKVKPL TTLLPPKLLT LDFAERIHTD PSSIKSASSD 60 YGNLVHKKPA AVLYPSSVQD IVSLINFAYN YSAPLTVSAR GRSHSINGQA MAPDGVVVDM 120 MHLRSIIEKT NGGVTVSKDP LLGFYADVGG EQLWIDVLNA TIEHGLAPVS WTDYLYLTVG 180 GTLSNAGISG QSFRYGPQIS NVYEMDVVTG RGELVTCSGH RNSDLFYAVL GGLGQFGIIT 240 RARIALEPAP KKVKWVRMLY SDFSEFTKDQ ERLISINGRK QSNALDYVEG SLLMNQGPPN 300 NWRSSFFPSS DIPRIMSLVT QHGIIYCLEV AKYYDDATQH SMSMELQLMF KGLSFADGFM 360 FEKDVPYVDF LDRVRSGEIK LQSQGLWDVP HPWLNLFLPK SSISDFNSGV FRDIVLKRNV 420 TTGPVLVYPM NRNKWDDRTS AVIPDEDVFY TVGFLHSSGF DDWQTYDDQN KDLLNYCDKA 480 GIKVKQYFPH YTTKEEWTDH FGSKWRTFVE RKAKFDPKRM LSPGQRIFN 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02805 | PLN02805 | 1.0e-7 | 42 | 251 | 227 | + D-lactate dehydrogenase [cytochrome] | ||
COG0277 | GlcD | 2.0e-28 | 44 | 525 | 491 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam01565 | FAD_binding_4 | 6.0e-29 | 69 | 218 | 151 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
pfam09265 | Cytokin-bind | 1.0e-146 | 250 | 528 | 284 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
PLN02441 | PLN02441 | 0 | 2 | 529 | 531 | + cytokinin dehydrogenase |
Gene Ontology | |
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GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0009690 | cytokinin metabolic process |
GO:0016491 | oxidoreductase activity |
GO:0019139 | cytokinin dehydrogenase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05760.1 | 0 | 1 | 529 | 1 | 538 | FAD linked oxidase, N-terminal [Medicago truncatula] |
GenBank | ACM79256.1 | 0 | 1 | 529 | 1 | 524 | cytokinin oxidase/dehydrogenase [Gossypium hirsutum] |
RefSeq | XP_002279519.1 | 0 | 1 | 529 | 1 | 519 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308300.1 | 0 | 1 | 529 | 1 | 527 | cytokinin oxidase [Populus trichocarpa] |
RefSeq | XP_002514119.1 | 0 | 1 | 529 | 1 | 529 | gulonolactone oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s1d_A | 0 | 35 | 529 | 17 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3s1c_A | 0 | 35 | 529 | 17 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3dq0_A | 0 | 35 | 529 | 17 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3c0p_A | 0 | 35 | 529 | 17 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3bw7_A | 0 | 35 | 529 | 17 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |