Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29916.m000522 |
Family | CE8 |
Protein Properties | Length: 276 Molecular Weight: 30821.8 Isoelectric Point: 9.3822 |
Chromosome | Chromosome/Scaffold: 29916 Start: 77060 End: 79533 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 13 | 266 | 0 |
TEKVVVPVTKPYITFQGAGRDVTFIEWHDRASDRGANGQQLRTYRTASVTVFASYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFAGCGFYGAQ DTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRKSPDEKTGFAFLRCKVTGTGPLYVGRAMGQYSRIVYAYTYFDDLVAHG GWDDWDHVSNKNKTAFFGVYKCWGPGAAKVRGVSWARELDFESAHKFLAKSFVN |
Full Sequence |
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Protein Sequence Length: 276 Download |
MNSSKKKFCK LSTEKVVVPV TKPYITFQGA GRDVTFIEWH DRASDRGANG QQLRTYRTAS 60 VTVFASYFSA RNISFKNTAP APMPGMQGWQ AAAFRISGDK AYFAGCGFYG AQDTLCDDAG 120 RHYFKECYIE GSIDFIFGNG RSMYKDCELH SIATRFGSIA AQDRKSPDEK TGFAFLRCKV 180 TGTGPLYVGR AMGQYSRIVY AYTYFDDLVA HGGWDDWDHV SNKNKTAFFG VYKCWGPGAA 240 KVRGVSWARE LDFESAHKFL AKSFVNGRHW IAPSDA |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 1.0e-87 | 13 | 273 | 263 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 3.0e-94 | 14 | 276 | 271 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-96 | 14 | 271 | 260 | + pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-118 | 13 | 273 | 261 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 0 | 14 | 276 | 263 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI31927.1 | 0 | 2 | 276 | 71 | 349 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199561.1 | 0 | 14 | 276 | 100 | 362 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002266321.1 | 0 | 2 | 276 | 78 | 356 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303355.1 | 0 | 14 | 273 | 55 | 314 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528921.1 | 0 | 1 | 276 | 1 | 276 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 6e-33 | 14 | 271 | 48 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-25 | 55 | 271 | 79 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.00000000000006 | 18 | 151 | 48 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.00000000000006 | 18 | 151 | 48 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.00000000000006 | 18 | 151 | 48 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY273837 | 263 | 14 | 276 | 0 |
EG517791 | 263 | 14 | 276 | 0 |
EX098970 | 263 | 14 | 276 | 0 |
FQ422665 | 248 | 13 | 260 | 0 |
FC912864 | 238 | 14 | 251 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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