| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29916.m000523 |
| Family | GT8 |
| Protein Properties | Length: 483 Molecular Weight: 55649.3 Isoelectric Point: 8.3657 |
| Chromosome | Chromosome/Scaffold: 29916 Start: 82920 End: 86654 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 62 | 281 | 3.6e-30 |
| DYEFYVATRVLIRSLSKLHVDADLVVIASIDVPLRWIHALEQEDGARVVRVENVNNPYKNQPHFDRRFKLTLNKLYAWSLVDYDRVVMLDADNLFLRKTD ELFQCGQFCAVFINPCIFHTGLFVLQPSKLVFKDMLHQLEIGKDNPDGADQGFIGGYFPDLLDKPMFYPPANGTALEGSYRLPLGYQMDATYYYLRLRWN VPCGPNSVITFPGAPWLKPW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 483 Download |
| MGWIDNTWVL KLLFLLFTFF VYETAAYGEP QLLQQQQKQQ HEYRPRHRNA YATMMYMGTP 60 RDYEFYVATR VLIRSLSKLH VDADLVVIAS IDVPLRWIHA LEQEDGARVV RVENVNNPYK 120 NQPHFDRRFK LTLNKLYAWS LVDYDRVVML DADNLFLRKT DELFQCGQFC AVFINPCIFH 180 TGLFVLQPSK LVFKDMLHQL EIGKDNPDGA DQGFIGGYFP DLLDKPMFYP PANGTALEGS 240 YRLPLGYQMD ATYYYLRLRW NVPCGPNSVI TFPGAPWLKP WYWWSWPVLP LGLQWHEQRL 300 QSLGYAAELP MVFIQSIIYI GIIAVTRLAR PNISKLCYRR TDKNISLIQA GLKLIAIWSI 360 LAAYVLPFFI IPCTIHPLLG WALYLLGSFA LCSIAINAFM LPMVHVLTPW LGIFGVLLVM 420 AFPWYPDGVV RALSIFGYAF CCAPFAWVSL VKVMACLQVS LEREVFFPRL GESSPPSGFN 480 KLY 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00176 | PLN00176 | 4.0e-6 | 72 | 221 | 187 | + galactinol synthase | ||
| COG5597 | COG5597 | 6.0e-7 | 59 | 225 | 182 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| cd00505 | Glyco_transf_8 | 6.0e-8 | 121 | 219 | 127 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
| pfam01501 | Glyco_transf_8 | 2.0e-12 | 62 | 221 | 196 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| cd02537 | GT8_Glycogenin | 2.0e-63 | 49 | 302 | 264 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77033.1 | 0 | 54 | 470 | 1 | 422 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_193393.4 | 0 | 6 | 483 | 10 | 494 | transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_565817.2 | 0 | 13 | 483 | 10 | 497 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
| RefSeq | XP_002269578.1 | 0 | 24 | 475 | 19 | 465 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002528922.1 | 0 | 1 | 483 | 1 | 483 | glucosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u2x_B | 0.0000000004 | 131 | 219 | 83 | 172 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3u2x_A | 0.0000000004 | 131 | 219 | 83 | 172 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3u2v_B | 0.0000000004 | 131 | 219 | 83 | 172 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3u2v_A | 0.0000000004 | 131 | 219 | 83 | 172 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3u2u_B | 0.0000000004 | 131 | 219 | 83 | 172 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
