Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29927.m000621 |
Family | GH17 |
Protein Properties | Length: 181 Molecular Weight: 20136.8 Isoelectric Point: 6.2653 |
Chromosome | Chromosome/Scaffold: 29927 Start: 244430 End: 244975 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 1 | 164 | 0 |
MKPLLQFFAQIGSPFCLNAYPFLAYMGDPGNIDINYALFQKTEGIYDPKTDLHYDNMLDAQIDAAYAALEDAGFKKMEVIVTETGWASHGDDNEAAATSD NARTYNYNLRKRLAKRKGTPFRPKMVVKAYVFAIFNEDLKPGPTSERNFGLFKADGSISYDVGF |
Full Sequence |
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Protein Sequence Length: 181 Download |
MKPLLQFFAQ IGSPFCLNAY PFLAYMGDPG NIDINYALFQ KTEGIYDPKT DLHYDNMLDA 60 QIDAAYAALE DAGFKKMEVI VTETGWASHG DDNEAAATSD NARTYNYNLR KRLAKRKGTP 120 FRPKMVVKAY VFAIFNEDLK PGPTSERNFG LFKADGSISY DVGFHGLKSS SAESSLFSLK 180 V |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 76 | 155 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-45 | 1 | 164 | 164 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25165.1 | 0 | 1 | 180 | 189 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
GenBank | ABK95381.1 | 0 | 1 | 166 | 1 | 166 | unknown [Populus trichocarpa] |
RefSeq | XP_002282272.1 | 0 | 1 | 180 | 188 | 366 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 1 | 172 | 165 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527196.1 | 0 | 1 | 181 | 1 | 181 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 1e-35 | 1 | 164 | 149 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 1e-35 | 1 | 164 | 149 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 1e-31 | 1 | 164 | 155 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 2e-31 | 1 | 164 | 159 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 2e-31 | 1 | 164 | 159 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT472060 | 166 | 1 | 166 | 0 |
DV153609 | 166 | 1 | 166 | 0 |
EC941028 | 166 | 1 | 166 | 0 |
CD012371 | 166 | 1 | 166 | 0 |
EX266745 | 166 | 1 | 166 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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