y
Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 29939.m000546 |
Family | GH27 |
Protein Properties | Length: 184 Molecular Weight: 20166 Isoelectric Point: 6.3332 |
Chromosome | Chromosome/Scaffold: 29939 Start: 528495 End: 530774 |
Description | Melibiase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH27 | 12 | 106 | 2.2e-30 |
AAYAGPGGWNDPDMLEVGNGGMTYQECRTYFSIWALMKAPLLIGCDVRNMTAETYEILTNKEVIAVNQDPHGVQGRKVQTSRTDGCLQVWAGPLT |
Full Sequence |
---|
Protein Sequence Length: 184 Download |
MTTIADLNDK WAAYAGPGGW NDPDMLEVGN GGMTYQECRT YFSIWALMKA PLLIGCDVRN 60 MTAETYEILT NKEVIAVNQD PHGVQGRKVQ TSRTDGCLQV WAGPLTGHRM AVVLCNRCSK 120 SATITVRWDA LGVESGTTVV VRDLWQHKDI TGDSAASFGT RVDAHAAQCI FLLPGQCCVL 180 KEYH 240 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 2.0e-7 | 16 | 90 | 88 | + putative alpha-galactosidase; Provisional | ||
PLN02899 | PLN02899 | 3.0e-8 | 20 | 78 | 72 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 6.0e-67 | 1 | 174 | 174 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 1.0e-74 | 1 | 174 | 174 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 6.0e-99 | 1 | 174 | 174 | + alpha-galactosidase |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB87430.1 | 0 | 1 | 174 | 253 | 426 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_974447.1 | 0 | 1 | 174 | 232 | 405 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002325481.1 | 0 | 1 | 174 | 207 | 380 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520852.1 | 0 | 1 | 174 | 179 | 352 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
RefSeq | XP_002523047.1 | 0 | 1 | 184 | 1 | 184 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 1 | 174 | 193 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 5e-31 | 15 | 173 | 231 | 391 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 3a23_B | 5e-28 | 18 | 175 | 232 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 3a23_A | 5e-28 | 18 | 175 | 232 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 3a22_B | 5e-28 | 18 | 175 | 232 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EG685649 | 174 | 1 | 174 | 0 |
EG692506 | 165 | 1 | 165 | 0 |
EG670983 | 174 | 1 | 174 | 0 |
FG411477 | 174 | 1 | 174 | 0 |
CV231175 | 174 | 1 | 174 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|