Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29981.m000586 |
Family | AA3 |
Protein Properties | Length: 747 Molecular Weight: 81744.8 Isoelectric Point: 8.1532 |
Chromosome | Chromosome/Scaffold: 29981 Start: 133097 End: 138434 |
Description | fatty alcohol oxidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 230 | 743 | 0 |
LCKIKCDVVIVGSGCGGGVAAAVLAASGQKVLVLEKGNYFTAKDFSGLEGPSYNHLYEAGGLMPSADAKFIILAGSVVGGGSAVNWSACINTPNYVLKEW AENHKIQLFGSPEYLSAMDIVCKRIGVTENCVEEGFQNQVIRKGCENLGLEINTVPRNSSEKHYCGSCGYGCQTGDKKGTDSTWLVDAVNNGAVILTGCK AERFILEENNKKSGGSQRKKKCLGVIAKILKNDNIWMRLQIEARVTISACGALSTPPLMISSGLNNPNIGRNLHLHPVLMTWGYFPDSNTVFKGKSFEGG IITSVHKVASEDSNVRAIIETPQLGPASFAALCPWESALDFKERLLKYSRTANLITIIRDRGSGEVKSEGRIAYNFDALDIENLKAGLRQSLRILVAAGA VEVGTHRSDGQRLKCQGITKKQLEEFLDTVSPPRGPLSPGKDWVAYTSAHQLGSCRMGISEKEGAVDENGESWEAEGLFVCDASVLPSAIGVNPMITIQS TAYCLSERISKYLR |
Full Sequence |
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Protein Sequence Length: 747 Download |
MRKDCHPLLR GKTEETKKYR HGFSSAEMDS LASLCHTIWP PISAAQHHNQ EPANPAVQEF 60 FKASGSQYPL PDEVAELIAM RGLIEAVMVV RLVLLLLSTR LGTLLLSGSL CFGEKWPFIN 120 KFSSIPVEKR EKVLQKWLRH RFLTPIRLAF FYVKAICLHV FFTQIDENGN NPAWEAIGYK 180 VQNEENATQV PKERPLEKGI VETMHESDST FLNSIAQKGL KVAHVPGHNL CKIKCDVVIV 240 GSGCGGGVAA AVLAASGQKV LVLEKGNYFT AKDFSGLEGP SYNHLYEAGG LMPSADAKFI 300 ILAGSVVGGG SAVNWSACIN TPNYVLKEWA ENHKIQLFGS PEYLSAMDIV CKRIGVTENC 360 VEEGFQNQVI RKGCENLGLE INTVPRNSSE KHYCGSCGYG CQTGDKKGTD STWLVDAVNN 420 GAVILTGCKA ERFILEENNK KSGGSQRKKK CLGVIAKILK NDNIWMRLQI EARVTISACG 480 ALSTPPLMIS SGLNNPNIGR NLHLHPVLMT WGYFPDSNTV FKGKSFEGGI ITSVHKVASE 540 DSNVRAIIET PQLGPASFAA LCPWESALDF KERLLKYSRT ANLITIIRDR GSGEVKSEGR 600 IAYNFDALDI ENLKAGLRQS LRILVAAGAV EVGTHRSDGQ RLKCQGITKK QLEEFLDTVS 660 PPRGPLSPGK DWVAYTSAHQ LGSCRMGISE KEGAVDENGE SWEAEGLFVC DASVLPSAIG 720 VNPMITIQST AYCLSERISK YLRTKQP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01810 | betA | 5.0e-5 | 661 | 747 | 101 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
TIGR03970 | Rv0697 | 2.0e-5 | 676 | 743 | 69 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 1.0e-18 | 358 | 740 | 418 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
pfam05199 | GMC_oxred_C | 9.0e-22 | 600 | 734 | 143 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
pfam00732 | GMC_oxred_N | 2.0e-73 | 282 | 507 | 229 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1kdg_B | 0.00001 | 236 | 738 | 9 | 539 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
PDB | 1kdg_A | 0.00001 | 236 | 738 | 9 | 539 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
PDB | 1naa_B | 0.00001 | 236 | 738 | 4 | 534 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
PDB | 1naa_A | 0.00001 | 236 | 738 | 4 | 534 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
PDB | 3t37_A | 0.00005 | 221 | 505 | 11 | 308 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
Sequence Alignments (This image is cropped. Click for full image.) |
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