Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30024.m001736 |
Family | CE8 |
Protein Properties | Length: 562 Molecular Weight: 61243.9 Isoelectric Point: 9.0395 |
Chromosome | Chromosome/Scaffold: 30024 Start: 896876 End: 901509 |
Description | pectin methylesterase PCR fragment F |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 320 | 519 | 0 |
GKGKTVISGGKSVADNMTTFHTASFAATGAGFIARGITFVNWAGPAKHQAVALRVGADHAVVYNCSVVGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAA VVFQNCSIYARKPMPLQKNTITAQNRKDPNQNTGISIHACRILAQSDLEAAKGSFPTYLGRPWKLYSRVVYMLTYMGDHIHPRGWLEWNTTFALDTLYYV |
Full Sequence |
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Protein Sequence Length: 562 Download |
MKPLDYGRLG PSDQGGAGPS TGLDDHQSQH AMPPQRPHRK KIILLSFFSL ALIIASAVSA 60 TLLIGLRTRA SGKPSPLVAR KPTQAISKTC GKTRFPALCV NSLLDFPGSL TASEQDLVHI 120 SFNMTLQHFT KALYLSSTIS YLQMDTRVRS AFDDCLELLD DSVDALSRSL SAVAPSSGAT 180 NGRPQPIGSN QDVVTWLSAA LTNHDTCMEG FEELSGSVKD QMAAKLRDLS ELVSNCLAIF 240 SASDSDDFSG VPIQNRRRLM DADTSKQNAE GFPSWLGRRE RKLLTMPISA IQADIIVSQD 300 GNGTYKTIAE AIKKAPEKNG KGKTVISGGK SVADNMTTFH TASFAATGAG FIARGITFVN 360 WAGPAKHQAV ALRVGADHAV VYNCSVVGYQ DTLYVHSNRQ FFRECDIYGT VDFIFGNAAV 420 VFQNCSIYAR KPMPLQKNTI TAQNRKDPNQ NTGISIHACR ILAQSDLEAA KGSFPTYLGR 480 PWKLYSRVVY MLTYMGDHIH PRGWLEWNTT FALDTLYYVI KGKPNCFIVN LALNPSGYAK 540 PNLQIWPASA TDMSGVRLNC II |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 5.0e-130 | 121 | 518 | 429 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 1.0e-130 | 67 | 510 | 482 | + pectinesterase | ||
PLN02301 | PLN02301 | 1.0e-131 | 82 | 518 | 470 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-151 | 294 | 518 | 256 | + Pectinesterase. | ||
PLN02484 | PLN02484 | 0 | 4 | 518 | 549 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42038.1 | 0 | 80 | 518 | 83 | 559 | pectin methylesterase 1 [Pyrus communis] |
RefSeq | XP_002278061.1 | 0 | 78 | 518 | 68 | 539 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
RefSeq | XP_002317777.1 | 0 | 65 | 518 | 14 | 494 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321999.1 | 0 | 4 | 518 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516698.1 | 0 | 1 | 562 | 1 | 562 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 289 | 518 | 3 | 263 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 291 | 518 | 1 | 259 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 8e-19 | 368 | 504 | 129 | 279 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 8e-19 | 368 | 504 | 129 | 279 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 8e-19 | 368 | 504 | 129 | 279 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |