| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30045.m000479 |
| Family | GH51 |
| Protein Properties | Length: 678 Molecular Weight: 74921.6 Isoelectric Point: 5.0877 |
| Chromosome | Chromosome/Scaffold: 30045 Start: 271905 End: 280936 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 226 | 661 | 0 |
| KGVTWFDQVSAMPIDTYKGHGFRKDLVQMLVDIKPRFFRFPGGCFVEGEWLRNAFRWKETIGPWEERPGHFGDVWMYWTDDGLGYFEFLQLSEDLGASPI WVFNNGISHNDQVDTTSILPFVQEALDGIEFARGDSNSKWGSVRAAMGHPEPFDLRYVAVGNEDCGKKNYRGNYLKFYDAIKRVYPDIKIISNCDGSSHS LDHPADYYDFHVYTSANNLFSMAHQFDRTSRKGPKAFVSEYAVTGKDAGTGSLLAGLAEAAFLIGLEKNSDIVEMASYAPLFVHSNNRRWNPDAIVFNSS QLYGTPSYWVQRFFMDSSGATLINTTLQTNSSTSLIASAIIWQNSVDSKNYLKIKVVNFGSSTVNLKISIDGLGLNSIQLSGSTKMLLTSANVMDENSFN DPKKVLPTLSMLDHAGKDMDVVLPPYSLTSYDLLTE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 678 Download |
| MNIMASCKAS FTILFLYLFL IGLWFTYTCS AVEFEANPTA QLLVDASVSR PIPETLFGIF 60 FEEINHAGAG GIWGELVNNR GFEAGGPNIP SNIDPWSIIG DESTIIVSTD RSSCFERNKV 120 ALRMDVLCDS KGSNNCPDGG VGIYNPGFWG MNIEEGKTYK VVLYVRSLGS INISVSLTDS 180 SGLQILATAN IIASASDVLN WTKAEVLLEA KGTNHNSRLQ LKTSQKGVTW FDQVSAMPID 240 TYKGHGFRKD LVQMLVDIKP RFFRFPGGCF VEGEWLRNAF RWKETIGPWE ERPGHFGDVW 300 MYWTDDGLGY FEFLQLSEDL GASPIWVFNN GISHNDQVDT TSILPFVQEA LDGIEFARGD 360 SNSKWGSVRA AMGHPEPFDL RYVAVGNEDC GKKNYRGNYL KFYDAIKRVY PDIKIISNCD 420 GSSHSLDHPA DYYDFHVYTS ANNLFSMAHQ FDRTSRKGPK AFVSEYAVTG KDAGTGSLLA 480 GLAEAAFLIG LEKNSDIVEM ASYAPLFVHS NNRRWNPDAI VFNSSQLYGT PSYWVQRFFM 540 DSSGATLINT TLQTNSSTSL IASAIIWQNS VDSKNYLKIK VVNFGSSTVN LKISIDGLGL 600 NSIQLSGSTK MLLTSANVMD ENSFNDPKKV LPTLSMLDHA GKDMDVVLPP YSLTSYDLLT 660 ESSNIKITGT DSLSRSSI |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 0.007 | 74 | 223 | 153 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3534 | AbfA | 6.0e-33 | 246 | 652 | 477 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 9.0e-37 | 464 | 652 | 206 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-45 | 464 | 652 | 201 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 27 | 678 | 21 | 675 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABV32544.1 | 0 | 25 | 678 | 19 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 4 | 678 | 1 | 675 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002307940.1 | 0 | 4 | 678 | 1 | 670 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 1 | 678 | 1 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ug5_F | 2e-22 | 246 | 630 | 68 | 474 | A Chain A, Glycoside Hydrolase Family 77 4-Alpha-Glucanotransferase From Thermus Brockianus |
| PDB | 3ug5_E | 2e-22 | 246 | 630 | 68 | 474 | A Chain A, Glycoside Hydrolase Family 77 4-Alpha-Glucanotransferase From Thermus Brockianus |
| PDB | 3ug5_D | 2e-22 | 246 | 630 | 68 | 474 | A Chain A, Glycoside Hydrolase Family 77 4-Alpha-Glucanotransferase From Thermus Brockianus |
| PDB | 3ug5_C | 2e-22 | 246 | 630 | 68 | 474 | A Chain A, Glycoside Hydrolase Family 77 4-Alpha-Glucanotransferase From Thermus Brockianus |
| PDB | 3ug5_B | 2e-22 | 246 | 630 | 68 | 474 | A Chain A, Glycoside Hydrolase Family 77 4-Alpha-Glucanotransferase From Thermus Brockianus |
