| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30063.m001451 |
| Family | GH47 |
| Protein Properties | Length: 558 Molecular Weight: 63768.1 Isoelectric Point: 5.9772 |
| Chromosome | Chromosome/Scaffold: 30063 Start: 925131 End: 936818 |
| Description | alpha-mannosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH47 | 98 | 528 | 0 |
| MVHAWSSYEKYAWGHDELQPQTRNGIDSFGGLGATLIDSLDTLFIMGLHEQFQKAREWVANSLDFNKNYEASVFETTIRVVGGLLSAYDLSGDKVFLEKA RDIADRLLPAWSTPSGIPYNTINLAHGNAHNPRWTGGNSILADSGTEQLEFIALSQRTKDPKYQQKVENVIRELHTTFPADGLLPIYINPHTGMSSYSVI TFGAMGDSFYEYLLKVWIQGNKTEAVKHYREMWETSMKGLQSLVRRTTPSSFTYLCEKNGNHLSDKMDELACFAPGMLALGSFGYGTDNAEKMLLLAEEL AWTCYNFYQSTPTKLSGENYFFHDGQDMNVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFQAFERNSRIDTGYVGLKDVNTGVKDNMMQSFFLAE TLKYFYLLFSPPTVISLDEWVFNTEAHPLRI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 558 Download |
| MGKKSSSAIL SNTKNNNKIL WIRPNRLVFF IFGFVSLTFL LLDRQSLSRE HQVQISKLNE 60 ELRALNSEVE ELETQMKKNK EEEDPVSVER REKVKEAMVH AWSSYEKYAW GHDELQPQTR 120 NGIDSFGGLG ATLIDSLDTL FIMGLHEQFQ KAREWVANSL DFNKNYEASV FETTIRVVGG 180 LLSAYDLSGD KVFLEKARDI ADRLLPAWST PSGIPYNTIN LAHGNAHNPR WTGGNSILAD 240 SGTEQLEFIA LSQRTKDPKY QQKVENVIRE LHTTFPADGL LPIYINPHTG MSSYSVITFG 300 AMGDSFYEYL LKVWIQGNKT EAVKHYREMW ETSMKGLQSL VRRTTPSSFT YLCEKNGNHL 360 SDKMDELACF APGMLALGSF GYGTDNAEKM LLLAEELAWT CYNFYQSTPT KLSGENYFFH 420 DGQDMNVGTS WNILRPETVE SLFYLWRLTG NKTYQEWGWN IFQAFERNSR IDTGYVGLKD 480 VNTGVKDNMM QSFFLAETLK YFYLLFSPPT VISLDEWVFN TEAHPLRIVT RDENVQIAVG 540 QGLPVRVRGR KEGRFGLD |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04156 | IncA | 0.001 | 27 | 120 | 103 | + IncA protein. Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is non-fusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA, is functionally associated with the homotypic fusion of inclusions. This family probably includes members of the wider Inc family rather than just IncA. | ||
| pfam01532 | Glyco_hydro_47 | 0 | 97 | 528 | 451 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| PTZ00470 | PTZ00470 | 0 | 82 | 528 | 459 | + glycoside hydrolase family 47 protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16414.1 | 0 | 23 | 556 | 26 | 578 | AF126550_1 mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max] |
| EMBL | CBI18472.1 | 0 | 23 | 554 | 22 | 571 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002325257.1 | 0 | 1 | 558 | 1 | 572 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519409.1 | 0 | 1 | 558 | 1 | 558 | mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis] |
| RefSeq | XP_002528166.1 | 0 | 52 | 558 | 11 | 525 | mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fo3_A | 0 | 83 | 530 | 2 | 458 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1fo2_A | 0 | 83 | 530 | 2 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 83 | 530 | 2 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 61 | 530 | 59 | 536 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1nxc_A | 0 | 78 | 537 | 8 | 473 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
