Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30071.m000430 |
Family | CE8 |
Protein Properties | Length: 388 Molecular Weight: 43486.1 Isoelectric Point: 6.2383 |
Chromosome | Chromosome/Scaffold: 30071 Start: 31987 End: 34814 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 40 | 328 | 0 |
VTVGKSGHEQFKTIQTAIDSIPQSNNKWIKITVSPGVYMEKVNIPEEKPCIFLEGSGRSLSTIVFNAHEETDTSATFSSLADNFLATGITFQNSYNRALK EEDEKIRQAVAAKLFGDKSAFYECGFVGFQDTLWDEKGRHYFYNCYIEGAIDFIFGNGQSFYQDCLLNATSPAVAGNVEAGYITAQSRGSNTETTGFVFR KGSVSGSSQTYLGRAYGPYSRVIFHETTFNAIVSPQGWNAWHFQGRQGNLVYTEIDCKGPGSDTSKRVPWMKKLDQEEICKFSRSSFID |
Full Sequence |
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Protein Sequence Length: 388 Download |
MQLPWLLVFI IIIMWLNVYL AVVYGAVECK NWSENVASTV TVGKSGHEQF KTIQTAIDSI 60 PQSNNKWIKI TVSPGVYMEK VNIPEEKPCI FLEGSGRSLS TIVFNAHEET DTSATFSSLA 120 DNFLATGITF QNSYNRALKE EDEKIRQAVA AKLFGDKSAF YECGFVGFQD TLWDEKGRHY 180 FYNCYIEGAI DFIFGNGQSF YQDCLLNATS PAVAGNVEAG YITAQSRGSN TETTGFVFRK 240 GSVSGSSQTY LGRAYGPYSR VIFHETTFNA IVSPQGWNAW HFQGRQGNLV YTEIDCKGPG 300 SDTSKRVPWM KKLDQEEICK FSRSSFIDED GWLHKLPSLQ PLTYVGYHHP LDSLPLNVLP 360 PSQSNSSSRL HLLLAVINIL FGFYYITN |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 1.0e-83 | 39 | 339 | 305 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 1.0e-91 | 39 | 333 | 297 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 5.0e-92 | 40 | 333 | 294 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 2.0e-109 | 18 | 337 | 320 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 4.0e-118 | 37 | 337 | 301 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 33 | 334 | 2 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-34 | 36 | 334 | 1 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 7e-20 | 40 | 337 | 8 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 7e-20 | 40 | 337 | 8 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 7e-20 | 40 | 337 | 8 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |