| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30074.m001370 |
| Family | GH35 |
| Protein Properties | Length: 828 Molecular Weight: 91385.6 Isoelectric Point: 7.6117 |
| Chromosome | Chromosome/Scaffold: 30074 Start: 271171 End: 279467 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 31 | 336 | 0 |
| LIVDGQRKLLFSGSIHYPRSTPEMWQSLIAKAKEGGLDVIDTYVFWNLHEPQPGQYDFSGRRDIVRFIKEVQAQGLYVCLRIGPFIQGEWSYGGLPFWLH DIPGIVFRSDNEPFKVQMQGFTTKIVTMMQSEKLYVSQGGPIILSQIENEYGTVEEAYHEKGPAYVKWAAQMAVGLNTGVPWVMCKQNDAPDPVINACNG LRCAETFVGPNSPNKPAIWTENWTTRYVITGENIRIRSVEDIAFQVTQFIVAKKGSFVNYYMYHGGTNFGRTASAFVPTSYYDQAPIDEYGLIRQPKWGH LKEMHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 828 Download |
| MAGVINLLLV LVAVLTGGAR GGDVTYDGRS LIVDGQRKLL FSGSIHYPRS TPEMWQSLIA 60 KAKEGGLDVI DTYVFWNLHE PQPGQYDFSG RRDIVRFIKE VQAQGLYVCL RIGPFIQGEW 120 SYGGLPFWLH DIPGIVFRSD NEPFKVQMQG FTTKIVTMMQ SEKLYVSQGG PIILSQIENE 180 YGTVEEAYHE KGPAYVKWAA QMAVGLNTGV PWVMCKQNDA PDPVINACNG LRCAETFVGP 240 NSPNKPAIWT ENWTTRYVIT GENIRIRSVE DIAFQVTQFI VAKKGSFVNY YMYHGGTNFG 300 RTASAFVPTS YYDQAPIDEY GLIRQPKWGH LKEMHAAIKL CLTPLLSGGQ VTISLGQQQQ 360 AFVFTGLSGE CAAFLLNNDT ANTASVQFRN ASYDLPPNSI SILPDCKTVA FNTAKVSTQY 420 TTRSMTRSKL LDGEDKWVQY QEAIVNFDET SVKSEAILEQ MSTTKDASDY LWYTFRFQQE 480 SSDTQAVLNV RSLGHVLHAF VNGQAVGYAQ GSHKNPQFTL QSTVSLSEGV NNVSLLSVMV 540 GMPDSGAYME RRAAGLRKVK IQEKEGNKEF TNYSWGYQVG LLGEKLQIFT DQGSSQVQWA 600 NFSKNALNPL TWYKTLFDAP LEDAPVALNL GSMGKGEAWV NGQSIGRYWP SYRASDGSSQ 660 IWYAYFNTGA IFRAVRYNVP RSFLKPKGNL LVVLEESGGN PLQISVDTAS ISKICSHVTA 720 SHLPLVSSWS KRTNTDNNNS LQARPRVKLD CPSNTKISNI LFASYGTPEG TCGDAYAVGM 780 CHSSSSEAIV QKACLGQMRC SIPVSSKYFG GDPCSANEKS LLVVAECK |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 5.0e-7 | 46 | 182 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 3.0e-19 | 749 | 827 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 3.0e-24 | 24 | 201 | 190 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 7.0e-152 | 30 | 338 | 323 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 24 | 827 | 822 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18991.1 | 0 | 25 | 828 | 33 | 821 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284529.1 | 0 | 25 | 828 | 25 | 813 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 21 | 827 | 5 | 797 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002327281.1 | 0 | 1 | 828 | 1 | 788 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521778.1 | 0 | 1 | 828 | 1 | 828 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 7e-40 | 30 | 334 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 8e-33 | 20 | 321 | 7 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 8e-33 | 20 | 321 | 7 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
