Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30076.m004513 |
Family | GH5 |
Protein Properties | Length: 404 Molecular Weight: 45752.9 Isoelectric Point: 8.0329 |
Chromosome | Chromosome/Scaffold: 30076 Start: 440999 End: 444117 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 47 | 370 | 5.3e-38 |
NNKSLYLNGFNAYWMMYMASDPSTREKVTSAFQQAAKNGMNIARTWAFSDGGYRALQISPGSYNQDMFKGLDFVISEARKYGIYVILCLVNNYKDFGGRP QYVQWARERGQQLTADDDFYTNPIVKAYYKNHVKAVITRINTITRVAYKDDPTIFAWELMNEPRSDDSPAGAQIQEWIKEMAAHVKSIDSNHLLEIGLEG FYGKSRKQFNPGNYLFGTDFISNNRIPDIDFATIHLYPEQWLPNSSEEEQAAFVNKWVQAHIEDSNLVIGKPLIIGEFGKSSKIPGYSLEKRDSYFVKIY DAIYSSAITRGPYAGGLFWQLMAQ |
Full Sequence |
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Protein Sequence Length: 404 Download |
MRRLNNLRLV AILLIFRLHV KCMAQSQTGS NNNGIFAKTN GTHFVMNNKS LYLNGFNAYW 60 MMYMASDPST REKVTSAFQQ AAKNGMNIAR TWAFSDGGYR ALQISPGSYN QDMFKGLDFV 120 ISEARKYGIY VILCLVNNYK DFGGRPQYVQ WARERGQQLT ADDDFYTNPI VKAYYKNHVK 180 AVITRINTIT RVAYKDDPTI FAWELMNEPR SDDSPAGAQI QEWIKEMAAH VKSIDSNHLL 240 EIGLEGFYGK SRKQFNPGNY LFGTDFISNN RIPDIDFATI HLYPEQWLPN SSEEEQAAFV 300 NKWVQAHIED SNLVIGKPLI IGEFGKSSKI PGYSLEKRDS YFVKIYDAIY SSAITRGPYA 360 GGLFWQLMAQ GMDSWGDGYE VVLEDCSSTA SIIAQQSGKL SSII |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.002 | 193 | 283 | 102 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam02449 | Glyco_hydro_42 | 0.0003 | 85 | 208 | 147 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG2730 | BglC | 3.0e-6 | 28 | 218 | 196 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 3.0e-7 | 75 | 329 | 260 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 8.0e-25 | 44 | 379 | 336 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG88068.1 | 0 | 12 | 403 | 18 | 409 | endo-1,4-beta-mannanase [Glycine max] |
EMBL | CAC08442.1 | 0 | 37 | 403 | 45 | 415 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
Swiss-Prot | Q8L5J1 | 0 | 7 | 403 | 7 | 398 | MAN4_SOLLC RecName: Full=Mannan endo-1,4-beta-mannosidase 4; AltName: Full=Beta-mannanase 4; AltName: Full=Endo-beta-1,4-mannanase 4; AltName: Full=LeMAN4a; AltName: Full=LeMAN4i; Flags: Precursor |
RefSeq | XP_002302695.1 | 0 | 1 | 402 | 1 | 402 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 1 | 404 | 1 | 404 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 30 | 403 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 41 | 395 | 18 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 41 | 395 | 18 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 41 | 395 | 18 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 41 | 395 | 18 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |