Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30076.m004627 |
Family | CE8 |
Protein Properties | Length: 335 Molecular Weight: 36929.9 Isoelectric Point: 8.1433 |
Chromosome | Chromosome/Scaffold: 30076 Start: 1275582 End: 1277194 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 42 | 326 | 0 |
IFVDKSGRGNFTTIQSAVDSIPKNNSRWIRVLISNDKYLEKVAIPANKPCIFLQGAGKNTSIEWDDHEDKPTSAIFISLADNIVAKSITFKNTYNLRSPN MVWRRATAIKIGGDKSAFYGCSFVGIQDTLYDCKGRHYFNKCYIEGAMDFIHGAAQSIYEESTVSVNIGNYEPGLTGCITAQKKEFPEQRSGFVFKNCKI TGTGKVLLGRAWGAYSTVVIYNSTISDVVVPDGWNAWHGVGHEGNLTYVEANNTGPGADTSKRVPWLKKLDAVQLSQFVNLSFID |
Full Sequence |
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Protein Sequence Length: 335 Download |
MHHLSSSLFI WVLLSPLSFS GCCKALDCSS NESNQNQVAH TIFVDKSGRG NFTTIQSAVD 60 SIPKNNSRWI RVLISNDKYL EKVAIPANKP CIFLQGAGKN TSIEWDDHED KPTSAIFISL 120 ADNIVAKSIT FKNTYNLRSP NMVWRRATAI KIGGDKSAFY GCSFVGIQDT LYDCKGRHYF 180 NKCYIEGAMD FIHGAAQSIY EESTVSVNIG NYEPGLTGCI TAQKKEFPEQ RSGFVFKNCK 240 ITGTGKVLLG RAWGAYSTVV IYNSTISDVV VPDGWNAWHG VGHEGNLTYV EANNTGPGAD 300 TSKRVPWLKK LDAVQLSQFV NLSFIDADGW IAKLP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 5.0e-82 | 40 | 331 | 294 | + Probable pectinesterase | ||
PLN02304 | PLN02304 | 4.0e-84 | 41 | 331 | 301 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 6.0e-86 | 34 | 331 | 310 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 2.0e-116 | 32 | 335 | 307 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 1.0e-125 | 39 | 335 | 300 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002330032.1 | 0 | 8 | 335 | 6 | 323 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515255.1 | 0 | 1 | 335 | 1 | 335 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002515259.1 | 0 | 11 | 335 | 334 | 660 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002515259.1 | 0 | 25 | 335 | 24 | 339 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 38 | 335 | 36 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3e-37 | 38 | 331 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-28 | 44 | 307 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.0000000000004 | 36 | 320 | 27 | 353 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000000003 | 52 | 318 | 18 | 330 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000000003 | 52 | 318 | 18 | 330 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |