| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30076.m004630 |
| Family | CE8 |
| Protein Properties | Length: 141 Molecular Weight: 14995.1 Isoelectric Point: 8.0485 |
| Chromosome | Chromosome/Scaffold: 30076 Start: 1292006 End: 1292723 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| CE8 | 3 | 137 | 1.4e-30 |
| FIHGVAQSIYEESTVSVNIGNCGPGLSGCITAKKKELPEQGSEFVPKNCKITGTGKVRLGRVWGAYSTVIIYNKTISDVVVPDGWNAWPSVGHVANLTYV EANNIGPGADTSKLVPWLKKLDAVQLSQFVNLSFI | |||
| Full Sequence |
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| Protein Sequence Length: 141 Download |
| MGFIHGVAQS IYEESTVSVN IGNCGPGLSG CITAKKKELP EQGSEFVPKN CKITGTGKVR 60 LGRVWGAYST VIIYNKTISD VVVPDGWNAW PSVGHVANLT YVEANNIGPG ADTSKLVPWL 120 KKLDAVQLSQ FVNLSFIGAD G |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02480 | PLN02480 | 1.0e-21 | 3 | 137 | 135 | + Probable pectinesterase | ||
| PLN02671 | PLN02671 | 2.0e-25 | 3 | 140 | 142 | + pectinesterase | ||
| PLN02304 | PLN02304 | 9.0e-27 | 3 | 140 | 142 | + probable pectinesterase | ||
| PLN02176 | PLN02176 | 1.0e-37 | 3 | 141 | 140 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 4.0e-42 | 3 | 141 | 139 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB63828.1 | 2e-31 | 3 | 141 | 97 | 236 | putative pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_002515255.1 | 0 | 1 | 141 | 189 | 329 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002515258.1 | 0 | 1 | 141 | 1 | 141 | pectinesterase, putative [Ricinus communis] |
| RefSeq | XP_002515259.1 | 0 | 1 | 141 | 193 | 333 | pectinesterase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.000000006 | 3 | 119 | 158 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.0000004 | 3 | 119 | 154 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| AW036464 | 119 | 1 | 119 | 5e-29 |
| DV991625 | 139 | 3 | 140 | 8e-27 |
| DR495026 | 139 | 3 | 140 | 2e-26 |
| EX317112 | 139 | 3 | 140 | 4e-26 |
| EX315894 | 139 | 3 | 140 | 4e-26 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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