Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30076.m004631 |
Family | CE8 |
Protein Properties | Length: 663 Molecular Weight: 74556.6 Isoelectric Point: 8.3075 |
Chromosome | Chromosome/Scaffold: 30076 Start: 1293880 End: 1297993 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 38 | 330 | 0 |
ITVDQSGNGDFTSVQSAIDSIPEMNTQWIHIQISPGKYREKVTIPVKKPCIFLEGAGIRLTSIEWGDHEATSTSATFTSYPDNIVAKGITFKNTYNLDIT KINWWGEKIIWRQAVSARIKGEQCAFYKCAFLGTQDTLWDEKGRHYFSNCYIEGAIDFIFGKAQSIYEGCVISVNIGKYPPGLQGCITAQKKEWPQHSSG FVFKNCVVSGTGKAFLGRAWGPYSTVIFYNSTLSDVIVSEGWNAWNYVHHEANFTYAEANNRGVGADTSKRVPWEKKLNADQLRRFLDLSFVD | |||
CE8 | 364 | 651 | 0 |
YTVDKSGKGNFTTIQSAINSVPEGNTQWLCIQISPEKYREKVTIPENKPCIFLKGAGRKLTIIEWGDHETTNTSATFSSYSDNIIAKGITFKNTYNLLQK PDRVDWKQAVSARIRGDKCAFYRCAFLGVQDTLWDEKGRHLFKKCFIEGAVDFIFGKAKSVYERCLIYVNIGRYEPELEGYITAQKKELTDHESGFVFKD SEINGTGKAYLGRAWGPYSTVIIQNTTLSDVVVPQGWNAWDYVQQEENFTYVEVDNKGAGANTSNRVPWLKKLNADELSKFLSMSFID |
Full Sequence |
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Protein Sequence Length: 663 Download |
MANLHSFLFA LVLLLLPFSS SSTALNCQPN QSKFARTITV DQSGNGDFTS VQSAIDSIPE 60 MNTQWIHIQI SPGKYREKVT IPVKKPCIFL EGAGIRLTSI EWGDHEATST SATFTSYPDN 120 IVAKGITFKN TYNLDITKIN WWGEKIIWRQ AVSARIKGEQ CAFYKCAFLG TQDTLWDEKG 180 RHYFSNCYIE GAIDFIFGKA QSIYEGCVIS VNIGKYPPGL QGCITAQKKE WPQHSSGFVF 240 KNCVVSGTGK AFLGRAWGPY STVIFYNSTL SDVIVSEGWN AWNYVHHEAN FTYAEANNRG 300 VGADTSKRVP WEKKLNADQL RRFLDLSFVD GGGWLAKIPK LHYPAACKAL DCQLQEFRKV 360 AFTYTVDKSG KGNFTTIQSA INSVPEGNTQ WLCIQISPEK YREKVTIPEN KPCIFLKGAG 420 RKLTIIEWGD HETTNTSATF SSYSDNIIAK GITFKNTYNL LQKPDRVDWK QAVSARIRGD 480 KCAFYRCAFL GVQDTLWDEK GRHLFKKCFI EGAVDFIFGK AKSVYERCLI YVNIGRYEPE 540 LEGYITAQKK ELTDHESGFV FKDSEINGTG KAYLGRAWGP YSTVIIQNTT LSDVVVPQGW 600 NAWDYVQQEE NFTYVEVDNK GAGANTSNRV PWLKKLNADE LSKFLSMSFI DSDGWLAKLP 660 NTS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 3.0e-86 | 30 | 335 | 317 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 3.0e-105 | 359 | 660 | 303 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 6.0e-112 | 30 | 339 | 311 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 7.0e-128 | 347 | 660 | 314 | + probable pectinesterase | ||
PLN02497 | PLN02497 | 3.0e-130 | 34 | 339 | 306 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4.2039e-45 | 356 | 656 | 1 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1gq8_A | 4e-39 | 38 | 335 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-29 | 366 | 632 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1xg2_A | 1e-28 | 40 | 335 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 2e-16 | 374 | 651 | 44 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |