| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30076.m004675 |
| Family | GH3 |
| Protein Properties | Length: 768 Molecular Weight: 82624.6 Isoelectric Point: 8.9676 |
| Chromosome | Chromosome/Scaffold: 30076 Start: 1524873 End: 1529182 |
| Description | beta-xylosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 75 | 321 | 0 |
| AVSRLGIKGYEWWSEALHGVSNVGPGTKFGGSFPGATSFPQVITTAASFNSTLWEAIGRVVSDEARAMYNGGAAGLTYWSPNVNILRDPRWGRGQETPGE DPLLVGKYAASYVKGLQGNDGERLKVAACCKHFTAYDLDNWNGVDRFHFNAKVSKQDMKDTFDVPFRMCVKEGKVASVMCSYNQVNGIPTCADPNLLRKT VRTQWGLNGYIVSDCDSVGVFYDKQHYTSTPEEAAADAIKAGLDLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 768 Download |
| MVSNSLIIFL FLLLGFSFRA SKAALEPFAC DSKDGTTKNL PFCQVKLPIQ DRVKDLIGRL 60 TLAEKVGLLV NNAGAVSRLG IKGYEWWSEA LHGVSNVGPG TKFGGSFPGA TSFPQVITTA 120 ASFNSTLWEA IGRVVSDEAR AMYNGGAAGL TYWSPNVNIL RDPRWGRGQE TPGEDPLLVG 180 KYAASYVKGL QGNDGERLKV AACCKHFTAY DLDNWNGVDR FHFNAKVSKQ DMKDTFDVPF 240 RMCVKEGKVA SVMCSYNQVN GIPTCADPNL LRKTVRTQWG LNGYIVSDCD SVGVFYDKQH 300 YTSTPEEAAA DAIKAGLDLD CGPFLAVHTQ DAVKRGLISE ADVNGALFNT LTVQMRLGMF 360 DGEPSAQPYG NLGPKDVCTP AHQELALEAG RQGIVLLKNH GPSLPLSPRR HRTVAIIGPN 420 SNVTVTMIGN YAGVACQYTT PLQGIGSYAK TIHQQGCADV GCVTDQLFSG AIDAARQADA 480 TVLVMGLDQS IEAEFRDRTG LLLPGRQQEL VSKVAMASKG PTILVLMSGG PIDVSFAKKD 540 PKIAAILWAG YPGQAGGAAI ADVLFGTINP GGKLPMTWYP QEYITNLPMT EMAMRSSQSK 600 GYPGRTYRFY QGKVVYPFGH GMSYTHFVHN IASAPTMVSV PLDGHRGNTS ISGKAIRVTH 660 TKCNKLSLGI QVDVKNVGSK DGTHTLLVYS APPAGRWSPH KQLVAFERVH VSAGTQERVG 720 ISIHVCKLLS VVDRSGIRRI PIGEHSIHIG NVKHSVSLQA TVLGVVKS 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 2.0e-56 | 75 | 457 | 389 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-62 | 61 | 344 | 314 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 5.0e-63 | 394 | 625 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 8.0e-86 | 41 | 723 | 772 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 20 | 760 | 762 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG10624.1 | 0 | 9 | 768 | 3 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
| RefSeq | NP_563659.1 | 0 | 9 | 768 | 8 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002270249.1 | 0 | 3 | 768 | 8 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316021.1 | 0 | 26 | 762 | 26 | 763 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515300.1 | 0 | 1 | 768 | 1 | 768 | Beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 111 | 723 | 91 | 696 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 3u48_A | 0 | 111 | 723 | 91 | 696 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 3u4a_B | 0 | 111 | 723 | 91 | 696 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 3u4a_A | 0 | 111 | 723 | 91 | 696 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2x41_A | 0 | 51 | 761 | 2 | 710 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
