Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 30078.m002222 |
Family | CE8 |
Protein Properties | Length: 394 Molecular Weight: 43602 Isoelectric Point: 7.8631 |
Chromosome | Chromosome/Scaffold: 30078 Start: 83933 End: 86321 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 85 | 362 | 0 |
SIQKAIDVVPDFSPSPTLIIIDSGTYREKVVVHTSKTNIILQGQSYMNTAIEWNDTANSTGGTVYSASVAIFAPNFTAYNISFKNTAPNPSPGEVGGQAV AIRVGGDQAAFYGCGFYGAQDTLNDDHGRHYFKECYIQGSIDFIFGNARSLFEGCIINSIAKPTRGGVSGSITAQARQSMSEQTGFSFVSCSIRGTGKVW LGRAWGAYATVVFSKTYMSNAISSDGWNDWRDPSRDQTVFFGEYGCYGPGANYIYRVPYAKQLSQYEAATYMDISYID |
Full Sequence |
---|
Protein Sequence Length: 394 Download |
MGIRPLSFWL LASAIALLSI LLSLYAIPSS PSTNASVSIQ DAFQLAILKR VIKKSGLQEV 60 LQLILSRHHH HRRRPKVKCD KNSWSIQKAI DVVPDFSPSP TLIIIDSGTY REKVVVHTSK 120 TNIILQGQSY MNTAIEWNDT ANSTGGTVYS ASVAIFAPNF TAYNISFKNT APNPSPGEVG 180 GQAVAIRVGG DQAAFYGCGF YGAQDTLNDD HGRHYFKECY IQGSIDFIFG NARSLFEGCI 240 INSIAKPTRG GVSGSITAQA RQSMSEQTGF SFVSCSIRGT GKVWLGRAWG AYATVVFSKT 300 YMSNAISSDG WNDWRDPSRD QTVFFGEYGC YGPGANYIYR VPYAKQLSQY EAATYMDISY 360 IDGNHWLHNY QKSVHNFPDN DDDDDRLVEF IQAY |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 3.0e-93 | 86 | 367 | 282 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-99 | 85 | 367 | 290 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 8.0e-104 | 85 | 367 | 284 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-123 | 85 | 369 | 291 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 4.0e-140 | 82 | 370 | 292 | + probable pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-37 | 85 | 368 | 21 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-33 | 85 | 369 | 17 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-17 | 85 | 355 | 20 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-17 | 85 | 355 | 20 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-17 | 85 | 355 | 20 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |