Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30106.m000677 |
Family | CE8 |
Protein Properties | Length: 396 Molecular Weight: 43507.9 Isoelectric Point: 6.1642 |
Chromosome | Chromosome/Scaffold: 30106 Start: 696505 End: 699316 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 95 | 387 | 0 |
CVDPNGCCNFTTVQSAVDAVANFSQKRTIIWINSGIYYERVIVPITKQNVTFQGQGYTSTAIVWNNTANSSHGTFYSGSVQVFSNNFIAKNISFMNVAPI PGPGDMGAQAVAMRISGDQAAFWGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGDARSLYESCELISMANPVAPGQRSINGAVTAHGRTSKDENTGF AFVNCTLGGTGRIWLGRAWRPFSRVVFAFTSMTDIIAAEGWNDFNDPTRDQTIFYGEYNCSGPGANMTMRAAYVQRLNDTQASAFLDASFIDG |
Full Sequence |
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Protein Sequence Length: 396 Download |
MMSLRSISLT LLVAFFAVFA STAIINQNPA AFLKEVVFEL SHTIFSSPII ATIFSCNIEH 60 HHHKKHPDKG KLVNICDDFP IDIPPPDTNT TSTFCVDPNG CCNFTTVQSA VDAVANFSQK 120 RTIIWINSGI YYERVIVPIT KQNVTFQGQG YTSTAIVWNN TANSSHGTFY SGSVQVFSNN 180 FIAKNISFMN VAPIPGPGDM GAQAVAMRIS GDQAAFWGCG FFGAQDTLHD DKGRHYFKDC 240 YIQGSIDFIF GDARSLYESC ELISMANPVA PGQRSINGAV TAHGRTSKDE NTGFAFVNCT 300 LGGTGRIWLG RAWRPFSRVV FAFTSMTDII AAEGWNDFND PTRDQTIFYG EYNCSGPGAN 360 MTMRAAYVQR LNDTQASAFL DASFIDGDQW LQSYNA |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 1.0e-91 | 88 | 392 | 313 | + pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-102 | 96 | 396 | 309 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 1.0e-106 | 96 | 391 | 297 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 6.0e-122 | 93 | 392 | 307 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 0 | 21 | 396 | 380 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 95 | 393 | 10 | 310 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 5e-39 | 95 | 393 | 6 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-17 | 106 | 385 | 17 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-17 | 106 | 385 | 17 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-17 | 106 | 385 | 17 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |