| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30128.m008776 |
| Family | GH2 |
| Protein Properties | Length: 973 Molecular Weight: 110444 Isoelectric Point: 6.2488 |
| Chromosome | Chromosome/Scaffold: 30128 Start: 953117 End: 958644 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 38 | 752 | 0 |
| TEPWMEAAIPGTVLGTLLKNKKVPDPFYGLENEAIIDIADSGRDHYTFWFFTTFECKLSGNQHLELKFRAINYSAEVYLNGHQKVLPKGMFRRHSLDVTD ILNPEGTNLLAVLVHPPDHPGSIPPEGGQGGDHQIGKDVATQYVEGWDWIAPIRDRNTGIWDEASIYVTGPVKIIDPHLVSTFFDGYKRVYLHTTTELEN NSAWVAECNLNIQVTVELEGNFCLVEHLQTQHVSIPAGKSIQYTFPELFFYKPNLWWPNGMGKQSMYNVSITVDVEGYGESDSWTHLYGFRKIESYIDSL TGGRLFKVNGQPIFIRGGNWILSDGLLRLSRKRYRTDIKFHADMNFNMIRCWGGGLAERPEFYHYCDIYGLLVWQEFWITGDVDGRGQPVSNPDGPLDHD LFLLCARDTVKLLRNHPSLALWVGGNEQVPPPDINAALKNDLKLHPHFLHFDEDSKSVQDLSLQSGDPSQYLDGTRIYVQGSMWDGFANGKGDFTDGPYE IQYPESFFGDDFYKYGFNPEVGSVGMPVAATIRATMPPEGWQIPLFKKLPNGYVEEIPNPIWEYHTYIPYSKPGQVHDQILLYGVPTDLDDFCLKAQLVN YIQYRALIEGYSSHMWRKHTGFLIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLATYSIEVVNTQSVELSDVAIEASVWDLAGTCPYYK VFEKLTVPPKKTVSI | |||
| Full Sequence |
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| Protein Sequence Length: 973 Download |
| MAKIGKTVLD SGWLAARSTE VQFNGTQLTT THPPSGPTEP WMEAAIPGTV LGTLLKNKKV 60 PDPFYGLENE AIIDIADSGR DHYTFWFFTT FECKLSGNQH LELKFRAINY SAEVYLNGHQ 120 KVLPKGMFRR HSLDVTDILN PEGTNLLAVL VHPPDHPGSI PPEGGQGGDH QIGKDVATQY 180 VEGWDWIAPI RDRNTGIWDE ASIYVTGPVK IIDPHLVSTF FDGYKRVYLH TTTELENNSA 240 WVAECNLNIQ VTVELEGNFC LVEHLQTQHV SIPAGKSIQY TFPELFFYKP NLWWPNGMGK 300 QSMYNVSITV DVEGYGESDS WTHLYGFRKI ESYIDSLTGG RLFKVNGQPI FIRGGNWILS 360 DGLLRLSRKR YRTDIKFHAD MNFNMIRCWG GGLAERPEFY HYCDIYGLLV WQEFWITGDV 420 DGRGQPVSNP DGPLDHDLFL LCARDTVKLL RNHPSLALWV GGNEQVPPPD INAALKNDLK 480 LHPHFLHFDE DSKSVQDLSL QSGDPSQYLD GTRIYVQGSM WDGFANGKGD FTDGPYEIQY 540 PESFFGDDFY KYGFNPEVGS VGMPVAATIR ATMPPEGWQI PLFKKLPNGY VEEIPNPIWE 600 YHTYIPYSKP GQVHDQILLY GVPTDLDDFC LKAQLVNYIQ YRALIEGYSS HMWRKHTGFL 660 IWKTQNPWTG LRGQFYDHLL DQTAGFYGCR CAAEPIHVQL NLATYSIEVV NTQSVELSDV 720 AIEASVWDLA GTCPYYKVFE KLTVPPKKTV SIGEMKYPKS KNPKPVYFLL LKLYNMSDYG 780 IISRNFYWLH LPGGDYKLLE PYRRRKVPLK ITSKAFIKGS TYEIEMHVKN TSKKPDSKCS 840 TYKNNFITNL GTDDFDMTSV EPVNSGTKEK PEASLFQRIF RHFSQETDGL RVTEINGVEE 900 GVAFFLHFSV HASKANHKEG EDSRILPVHY SDNYFSLVPG EVMPIKISFE IPPGVTPRVT 960 LEGWNYHGGH NVL 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02836 | Glyco_hydro_2_C | 5.0e-6 | 342 | 464 | 129 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| pfam00703 | Glyco_hydro_2 | 6.0e-7 | 209 | 328 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10150 | PRK10150 | 2.0e-8 | 80 | 464 | 413 | + beta-D-glucuronidase; Provisional | ||
| PRK10340 | ebgA | 3.0e-14 | 98 | 464 | 381 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 9.0e-37 | 45 | 687 | 667 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 34 | 789 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 34 | 789 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 34 | 789 | 74 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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