Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30128.m008919 |
Family | CE8 |
Protein Properties | Length: 336 Molecular Weight: 37647.8 Isoelectric Point: 8.5303 |
Chromosome | Chromosome/Scaffold: 30128 Start: 1707452 End: 1708981 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 33 | 314 | 0 |
ITVDQSGHGDFTAVQKAIDSIPPNNNLWTRIYIKAAIYYEKVVIPQGKSFIILQGESRRRTIIRWEEAGSATESSTLILSAENFVAMDISFQNTYNLVIP EGPDGKRILWAPAATLYADKASFYRCGFSGVQDTLTDIQGRHYFKSCYIQGAIDFIWGGGQSVYEKCVINATTGILNGTAGFITAQGRENENDSSGFVFL SCKIAASGPVYLGRAYRAYSRVIFKMAYMPEAVMPQGWLPWNYTGHEEKITFSEVLCSGPGSDTSRRVKWEKNLTQKELNRL |
Full Sequence |
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Protein Sequence Length: 336 Download |
MHFLHFITML LLLCTSKGST KHDVEKGVIA RKITVDQSGH GDFTAVQKAI DSIPPNNNLW 60 TRIYIKAAIY YEKVVIPQGK SFIILQGESR RRTIIRWEEA GSATESSTLI LSAENFVAMD 120 ISFQNTYNLV IPEGPDGKRI LWAPAATLYA DKASFYRCGF SGVQDTLTDI QGRHYFKSCY 180 IQGAIDFIWG GGQSVYEKCV INATTGILNG TAGFITAQGR ENENDSSGFV FLSCKIAASG 240 PVYLGRAYRA YSRVIFKMAY MPEAVMPQGW LPWNYTGHEE KITFSEVLCS GPGSDTSRRV 300 KWEKNLTQKE LNRLMDGSRN SPDFNDRPSY RDSVFL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 7.0e-82 | 18 | 310 | 309 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 6.0e-86 | 5 | 311 | 310 | + putative pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-86 | 33 | 310 | 278 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 3.0e-88 | 31 | 326 | 297 | + Probable pectinesterase | ||
PLN02497 | PLN02497 | 2.0e-122 | 27 | 318 | 293 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 33 | 307 | 45 | 318 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197400.1 | 0 | 32 | 316 | 28 | 313 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 2 | 307 | 4 | 305 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002512520.1 | 0 | 1 | 336 | 1 | 336 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002518106.1 | 0 | 33 | 318 | 48 | 323 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4.00001e-40 | 25 | 303 | 1 | 282 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-33 | 28 | 302 | 1 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.00000000000002 | 35 | 203 | 35 | 219 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.0000000000003 | 43 | 236 | 18 | 227 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.0000000000003 | 43 | 236 | 18 | 227 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |