Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30128.m008973 |
Family | CBM43 |
Protein Properties | Length: 406 Molecular Weight: 41811.2 Isoelectric Point: 5.0432 |
Chromosome | Chromosome/Scaffold: 30128 Start: 1942349 End: 1943752 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 225 | 306 | 1e-35 |
WCVAKTGVSEIALQAALDYACGMGGADCSQIQQGGSCYNPNTLQNHASFAFNSYYQKNPAATSCDFGGTASIVSSNPSTGSC |
Full Sequence |
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Protein Sequence Length: 406 Download |
MGDLFVKSII KKATLATSIL PCYDVDIIMT VKSLVYPSAK QVAEFAAKLS KSLENTQIAG 60 QVAELYAEVS STEGFAEKEL RREHEQIFPS ARRELMKSLK AISHDEIDPP VTLPPDNPTP 120 TIVTVPATNP VTITPANPVS TPVQVPSTTP VLFPPTNPAV NPPAPITNPV TTPVAPITVP 180 GMQPITNPVT TYPAPPGNVP VTTPATNPVT PPATTNAPAI PGQSWCVAKT GVSEIALQAA 240 LDYACGMGGA DCSQIQQGGS CYNPNTLQNH ASFAFNSYYQ KNPAATSCDF GGTASIVSSN 300 PSTGSCVFPS SSLSSPSSTT TLPTPPSPTT NPAITPSTPG TGESGTGTPP SVLNSSSPGS 360 GTGTVFGSET PPGFNSSTSK SASFHPSFGC IILVTLFIAR TITLDM |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-23 | 224 | 295 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-41 | 224 | 308 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-19 | 224 | 312 | 12 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |