| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30131.m007196 |
| Family | GH2 |
| Protein Properties | Length: 1110 Molecular Weight: 125702 Isoelectric Point: 5.8621 |
| Chromosome | Chromosome/Scaffold: 30131 Start: 2144794 End: 2153049 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 87 | 976 | 0 |
| VKSMSGFWKFFLAPSPTKVPIKFYEPAFQDFEWQTLPVPSNWQMHGFDRPIYTNVVYPFPLDPPYVPEDNPTGCYRTYFQIPKEWQGRRILLHFEAVDSA FCAWVNGVPVGYSQDSRLPAEFEITEYCYSCDSGKSNVLAVQVIRWSDGSYLEDQDHWWLSGIHRDVLLLAKPQVFIVDYFFKSNLAEDFASAEIEVEVK LDSSQEMPKDKILDNFVIEAALYDTESWYNSDGAANLLSSQVADIKINPSFDAILGFLGYVLVGKVEKPKLWSAEQPNLYILVLTLKDAFGHVVDCESCL VGIRQVSKAPKQLLVNGQPVIIRGVNRHEHHPRIGKTNIESCMIKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFHLSGHIKHP TSEQSWAIAMIDRVIGMVERDKNHACIISWSLGNEASYGPNHSAAAGWIRGKDTSRLVHYEGGGSRTPSTDIVCPMYMRVWDIVKIANDPTELRPLILCE YSHAMGNSSGNICEYWEAIDSTFGLQGGFIWDWVDQGLLKENTDGSKYWAYGGDFGDTPNDLNFCLNGLTWPDRSPHPALHEVKYVYQPIKVSLKGSTLK ITNTYFFETTQGLEFSWAAHGDGHQLGSGILSLPLMKPQSSYDIELESGPWYPLWASYSGEIFLTVTAKLLHSTPWVETGHVISSTQVQLPSRKEIIPHV IKATDATLSSEILGDTVRVSQQTFWEITLNIQTGTVESWKVEGVTIMNKGILPCFWRAPTDNDKGGEENSYYSRWKAARIDNLEFLTKSCSIQEKTDHLV KIKAVYIGVPRDEDDSSQSSKQALFEVDIIYEIFGSGDLIIECNVSPSSDLPPLPRVGVEFHLVESVDHVRWYGKGPFECYPDRKAASHV | |||
| Full Sequence |
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| Protein Sequence Length: 1110 Download |
| MASLAANMVS PLETGHKVWE DPSFIKWRKR EPHVTLHCHE SVEGSLRYWY QRNKVDVLVS 60 KSAVWNDDAV KAALDCAAFW VKDLPFVKSM SGFWKFFLAP SPTKVPIKFY EPAFQDFEWQ 120 TLPVPSNWQM HGFDRPIYTN VVYPFPLDPP YVPEDNPTGC YRTYFQIPKE WQGRRILLHF 180 EAVDSAFCAW VNGVPVGYSQ DSRLPAEFEI TEYCYSCDSG KSNVLAVQVI RWSDGSYLED 240 QDHWWLSGIH RDVLLLAKPQ VFIVDYFFKS NLAEDFASAE IEVEVKLDSS QEMPKDKILD 300 NFVIEAALYD TESWYNSDGA ANLLSSQVAD IKINPSFDAI LGFLGYVLVG KVEKPKLWSA 360 EQPNLYILVL TLKDAFGHVV DCESCLVGIR QVSKAPKQLL VNGQPVIIRG VNRHEHHPRI 420 GKTNIESCMI KDLVLMKQNN INAVRNSHYP QHPRWYELCD LFGMYMIDEA NIETHGFHLS 480 GHIKHPTSEQ SWAIAMIDRV IGMVERDKNH ACIISWSLGN EASYGPNHSA AAGWIRGKDT 540 SRLVHYEGGG SRTPSTDIVC PMYMRVWDIV KIANDPTELR PLILCEYSHA MGNSSGNICE 600 YWEAIDSTFG LQGGFIWDWV DQGLLKENTD GSKYWAYGGD FGDTPNDLNF CLNGLTWPDR 660 SPHPALHEVK YVYQPIKVSL KGSTLKITNT YFFETTQGLE FSWAAHGDGH QLGSGILSLP 720 LMKPQSSYDI ELESGPWYPL WASYSGEIFL TVTAKLLHST PWVETGHVIS STQVQLPSRK 780 EIIPHVIKAT DATLSSEILG DTVRVSQQTF WEITLNIQTG TVESWKVEGV TIMNKGILPC 840 FWRAPTDNDK GGEENSYYSR WKAARIDNLE FLTKSCSIQE KTDHLVKIKA VYIGVPRDED 900 DSSQSSKQAL FEVDIIYEIF GSGDLIIECN VSPSSDLPPL PRVGVEFHLV ESVDHVRWYG 960 KGPFECYPDR KAASHVGIYE KNVCDMHVPY IVPGECSGRA DVRWVTFQNK EGKGIFASMH 1020 GNSPPMQMSV SYYSTRELHR ARHNKELVRG NDIEVHLDHK HMGIGGDDSW SPCVHEKYLV 1080 PAVPYSFSIR LCPITAATSG LRIYEPEHQN 1140 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 2.0e-94 | 811 | 1091 | 282 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 9.0e-107 | 396 | 677 | 292 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 6.0e-159 | 87 | 974 | 894 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 19 | 1093 | 1099 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 88 | 1097 | 1014 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 1 | 1110 | 1 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 1110 | 1 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 1110 | 1 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 1 | 1110 | 1 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 1110 | 1 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1jz2_D | 0 | 87 | 1092 | 51 | 1021 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 1jz2_C | 0 | 87 | 1092 | 51 | 1021 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 1jz2_B | 0 | 87 | 1092 | 51 | 1021 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 1jz2_A | 0 | 87 | 1092 | 51 | 1021 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 1jz1_P | 0 | 87 | 1092 | 51 | 1021 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO804274 | 394 | 129 | 510 | 0 |
| GE633099 | 259 | 785 | 1043 | 0 |
| EL444301 | 297 | 438 | 734 | 0 |
| ES794486 | 357 | 451 | 803 | 0 |
| HO804274 | 50 | 501 | 549 | 0.00000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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