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Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30147.m014042 |
Family | GT31 |
Protein Properties | Length: 670 Molecular Weight: 76293.4 Isoelectric Point: 8.213 |
Chromosome | Chromosome/Scaffold: 30147 Start: 4160478 End: 4164421 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 437 | 619 | 0 |
ERMAVRKSWMQHRLIKSSTVVARFFVALHGRKEVNLELKKEAEFFGDIVVVPYMDNYDLVVLKTVAICEYGVHTVRAKYIMKGDDDTFVRVDAVIDEARK VPEGRSLYIGNINYYHKPLRHGKWAVAYEEWPEEDYPPYANGPGYILSSDIAQFIVSEFERHKLRLFKMEDVSMGMWVEQFNS |
Full Sequence |
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Protein Sequence Length: 670 Download |
MKRGKLETRL NKFDMFMSLS RQRSIQILIA VGILYVFLVT LEIPVVFNTN ISSVSQETTT 60 TLTRPSMLQS EQDLQDKDAP TRPLNWVSHN SLQPTQSRSQ PITDILSSLK FDPKTFDPTK 120 KDGSVELHKS AKTAWQVGRK LWEGIVSGKV KVKEAQKPEN RSESCPHSVM LSGSEFLKQG 180 KVVELPCGLT LGSHVTVVGK PRGAHAENDP KISLVKDEGE AIMVSQFMME LQGLRTVEGE 240 DPPRILHFNP RLRGDWSGKP VIEQNTCYRM QWGTALRCEG WKSKADEETV DGQAKCEKWI 300 RDDDNHSEES KATWWLNRLI GRTKKVSVDW PFPFIEEKLF VLTLSAGLEG YHVNVDGRHV 360 TSFPYRTGYT LEDATGLTVN GDIDVHSVFA ASLPTAHPSF APQRHLQMSD RWRAPPLPQG 420 PAELFIGVLS AGNHFAERMA VRKSWMQHRL IKSSTVVARF FVALHGRKEV NLELKKEAEF 480 FGDIVVVPYM DNYDLVVLKT VAICEYGVHT VRAKYIMKGD DDTFVRVDAV IDEARKVPEG 540 RSLYIGNINY YHKPLRHGKW AVAYEEWPEE DYPPYANGPG YILSSDIAQF IVSEFERHKL 600 RLFKMEDVSM GMWVEQFNSS KPVLYSHSLK FCQFGCIEGY FTAHYQSPRQ MICLWDKLQK 660 LGKPQCCNMR 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 4.0e-17 | 186 | 388 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 2.0e-19 | 182 | 389 | 208 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam01762 | Galactosyl_T | 2.0e-19 | 436 | 615 | 189 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
pfam00337 | Gal-bind_lectin | 1.0e-24 | 182 | 388 | 207 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
PLN03133 | PLN03133 | 3.0e-119 | 125 | 670 | 558 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95149.1 | 0 | 36 | 670 | 1 | 642 | unknown [Populus trichocarpa] |
RefSeq | XP_002268603.1 | 0 | 1 | 670 | 1 | 670 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318619.1 | 0 | 1 | 668 | 1 | 664 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322135.1 | 0 | 1 | 670 | 1 | 674 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511491.1 | 0 | 1 | 670 | 1 | 670 | galactosyltransferase, putative [Ricinus communis] |