Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30147.m014161 |
Family | GT47 |
Protein Properties | Length: 497 Molecular Weight: 58042.8 Isoelectric Point: 8.4529 |
Chromosome | Chromosome/Scaffold: 30147 Start: 696169 End: 697748 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 99 | 440 | 0 |
CRLGRVFVYDLPSKFNAELVQNCDELNPWSSRCDALTNDGFGQKATGLSGIVPENLVPAWYWTDQFVSEIIFHNRILNHKCRTTEPSNATAFYIPFYAGL AVGKFLWFNYTAKDRDRHCEIMLDWVRDQPYYKRSNGWNHFLTMGRISWDFRRSKEEDWGSSCIYMPGMRNITRLLIERNPWDYFDVGVPYPTGFHPRSD NDILQWQDFVRTRNRNSLFCFAGAKRGAIKNDFRGLLLRHCYNESDSCRVVDCSGSRCSNGTSAILKTFLDSDFCLQPRGDSFTRRSIFDCMLAGSIPVL FWKRTAYYQYEWFLPGEPDSYSVFIHRDEVKNGTSVRKVLES |
Full Sequence |
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Protein Sequence Length: 497 Download |
MLSLSRPSSP EPYIRKPKSP PDDAVLPRKN SFTSLSSLLS HSYLNQSRTW LLLSVLSFQL 60 IILLAFRSLP LSFTHHRHHF PSPYTAHHFI TNPTADDECR LGRVFVYDLP SKFNAELVQN 120 CDELNPWSSR CDALTNDGFG QKATGLSGIV PENLVPAWYW TDQFVSEIIF HNRILNHKCR 180 TTEPSNATAF YIPFYAGLAV GKFLWFNYTA KDRDRHCEIM LDWVRDQPYY KRSNGWNHFL 240 TMGRISWDFR RSKEEDWGSS CIYMPGMRNI TRLLIERNPW DYFDVGVPYP TGFHPRSDND 300 ILQWQDFVRT RNRNSLFCFA GAKRGAIKND FRGLLLRHCY NESDSCRVVD CSGSRCSNGT 360 SAILKTFLDS DFCLQPRGDS FTRRSIFDCM LAGSIPVLFW KRTAYYQYEW FLPGEPDSYS 420 VFIHRDEVKN GTSVRKVLES YSKEEVRKMR EKVIEYIPKF VYARPNEGLG SIKDAFDVAI 480 DGVLRRFKEQ EEWDYKW |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-51 | 99 | 441 | 358 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 1 | 497 | 1 | 516 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 1 | 497 | 1 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 1 | 497 | 1 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 8 | 497 | 10 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 1 | 497 | 1 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY290373 | 362 | 119 | 479 | 0 |
EG691941 | 269 | 134 | 402 | 0 |
DY267021 | 343 | 138 | 479 | 0 |
EX676257 | 307 | 83 | 388 | 0 |
EG691941 | 34 | 381 | 414 | 0.00002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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