Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30147.m014360 |
Family | CE8 |
Protein Properties | Length: 364 Molecular Weight: 38876.3 Isoelectric Point: 6.5299 |
Chromosome | Chromosome/Scaffold: 30147 Start: 1524216 End: 1525907 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 355 | 0 |
KVRLDGSGEFKTITDAVKSIPSGNTQRVIVDIGPGTYKEKITIERDKPFVTFLGPPNMATIAFGGTAQEFGTVYSATLQVESEYFIAANLIIQNTAPRPD GKRPGAQALAVRIGGSKAAFYKVKMLGFQDTLCDDKGFHFFKDCYIEGTVDFIFGSGKSIYLNTEINVLTDAEPTVITAQARQGSEDTGFSFVHCSVGGT GTGALLGRAWMEAPRVVFAYTAMTGVVNPEGWSSNNHPEREAKVVFGEYKNTGPGAAPAGRVKFSKQLTEAEVAPFLSLGFIE |
Full Sequence |
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Protein Sequence Length: 364 Download |
MFRHLSIIGF VQYAIVAIVL TATIVSSADT TPMPDAASGI AGWFSANVKP LADRKGTLDP 60 ALEAAEANPK TIKVRLDGSG EFKTITDAVK SIPSGNTQRV IVDIGPGTYK EKITIERDKP 120 FVTFLGPPNM ATIAFGGTAQ EFGTVYSATL QVESEYFIAA NLIIQNTAPR PDGKRPGAQA 180 LAVRIGGSKA AFYKVKMLGF QDTLCDDKGF HFFKDCYIEG TVDFIFGSGK SIYLNTEINV 240 LTDAEPTVIT AQARQGSEDT GFSFVHCSVG GTGTGALLGR AWMEAPRVVF AYTAMTGVVN 300 PEGWSSNNHP EREAKVVFGE YKNTGPGAAP AGRVKFSKQL TEAEVAPFLS LGFIEGSKWL 360 LPPP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 9.0e-75 | 72 | 360 | 291 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 4.0e-75 | 71 | 362 | 302 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-78 | 70 | 360 | 303 | + pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-94 | 71 | 362 | 302 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 4 | 364 | 364 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309337.1 | 0 | 11 | 364 | 11 | 367 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 8 | 364 | 4 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511042.1 | 0 | 1 | 364 | 1 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002511043.1 | 0 | 1 | 364 | 1 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002511045.1 | 0 | 1 | 364 | 1 | 365 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3.00018e-42 | 63 | 360 | 1 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 5e-36 | 74 | 360 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-20 | 82 | 348 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-20 | 82 | 348 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-20 | 82 | 348 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |