Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30147.m014361 |
Family | CE8 |
Protein Properties | Length: 364 Molecular Weight: 38863 Isoelectric Point: 5.6853 |
Chromosome | Chromosome/Scaffold: 30147 Start: 1528661 End: 1530127 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 355 | 0 |
KVRLDGSGEFKTIADAVKSIPSGNTQRVIVDIGPGTYNEKITIERDKPFVTFLGPSNMATIAFGGTAHEYGTVYSATLQVESEYFIAANLIIQNTAPRPD GKTPGAQALAVRTGGSKAAFYKVKMLGFQDTLCDDKGFHFFKDCYIEGTVDFIFGSGKSIYLNTEINVLTDAEPTVITAQARQGSEDTGFSFVHCSVGGT GTGAHLGRAWMEAPRVVFAYTAMTGVVNPEGWSSNNHPEREAKVVFGEYKNTGPGAAPDGRVKYSKQLTDAEIAPFLSLGFIE |
Full Sequence |
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Protein Sequence Length: 364 Download |
MSRHLCFIGF VQFAILAIVL AANTVSSDDT TPIPEAASGI AGWFSANVKP LADRKGTLDP 60 ALEAAEANPK TIKVRLDGSG EFKTIADAVK SIPSGNTQRV IVDIGPGTYN EKITIERDKP 120 FVTFLGPSNM ATIAFGGTAH EYGTVYSATL QVESEYFIAA NLIIQNTAPR PDGKTPGAQA 180 LAVRTGGSKA AFYKVKMLGF QDTLCDDKGF HFFKDCYIEG TVDFIFGSGK SIYLNTEINV 240 LTDAEPTVIT AQARQGSEDT GFSFVHCSVG GTGTGAHLGR AWMEAPRVVF AYTAMTGVVN 300 PEGWSSNNHP EREAKVVFGE YKNTGPGAAP DGRVKYSKQL TDAEIAPFLS LGFIEGSKWL 360 LPPP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 2.0e-81 | 72 | 360 | 291 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 3.0e-82 | 71 | 362 | 302 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 5.0e-83 | 70 | 360 | 303 | + pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-99 | 71 | 362 | 303 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 4 | 364 | 364 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309337.1 | 0 | 1 | 364 | 1 | 367 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 8 | 364 | 4 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511042.1 | 0 | 27 | 364 | 27 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002511043.1 | 0 | 1 | 364 | 1 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002511045.1 | 0 | 1 | 364 | 1 | 365 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 9.99967e-42 | 63 | 360 | 1 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-36 | 74 | 360 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-22 | 82 | 348 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-22 | 82 | 348 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-22 | 82 | 348 | 18 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |