Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30147.m014362 |
Family | CE8 |
Protein Properties | Length: 366 Molecular Weight: 39911.8 Isoelectric Point: 9.5379 |
Chromosome | Chromosome/Scaffold: 30147 Start: 1532159 End: 1533756 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 356 | 0 |
KVRLDGSGDFKSVTDALKSIPSGNEHRVIVDIGCGVYTEKVTIDRIKPFVTLLGSSKHMPTLQFAGTAKKYGTVYSATLTVEADYFVAANIIIKNTAPRP DGRAGAQAVALRVAGDKAAFYNCRILGFQDTVCDDKGRHFFKDCYIEGTVDFIFGSGKSLYLKTHLNVIKEKFMTVITAQAKHTSSEDSGFSFVHSSITG DATDAYLGRAWMEMPEVVFSYSKMSKVVIPAGWSNYNHPEREKNILFAEYKCSGPGANPSGRVKFSKQLSDSAAKRFISLGYIQ |
Full Sequence |
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Protein Sequence Length: 366 Download |
MAKQITYIAI IHYVIAAILL AATTVISDDA TPIPAAENQV NSWFQANVKH FSSRKGTLDP 60 ALLAAEAAPK RIKVRLDGSG DFKSVTDALK SIPSGNEHRV IVDIGCGVYT EKVTIDRIKP 120 FVTLLGSSKH MPTLQFAGTA KKYGTVYSAT LTVEADYFVA ANIIIKNTAP RPDGRAGAQA 180 VALRVAGDKA AFYNCRILGF QDTVCDDKGR HFFKDCYIEG TVDFIFGSGK SLYLKTHLNV 240 IKEKFMTVIT AQAKHTSSED SGFSFVHSSI TGDATDAYLG RAWMEMPEVV FSYSKMSKVV 300 IPAGWSNYNH PEREKNILFA EYKCSGPGAN PSGRVKFSKQ LSDSAAKRFI SLGYIQGSKW 360 LLPPPS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02773 | PLN02773 | 1.0e-80 | 72 | 362 | 307 | + pectinesterase | ||
PLN02671 | PLN02671 | 9.0e-83 | 70 | 361 | 301 | + pectinesterase | ||
PLN02432 | PLN02432 | 5.0e-86 | 72 | 361 | 290 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-112 | 28 | 363 | 345 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 27 | 366 | 341 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002321778.1 | 0 | 9 | 366 | 8 | 362 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511043.1 | 0 | 1 | 365 | 1 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002511044.1 | 0 | 1 | 366 | 1 | 366 | Pectinesterase-3 precursor, putative [Ricinus communis] |
RefSeq | XP_002511045.1 | 0 | 1 | 366 | 1 | 366 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002530224.1 | 0 | 1 | 365 | 1 | 366 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 6.99949e-42 | 72 | 361 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-37 | 74 | 361 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-23 | 82 | 349 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-23 | 82 | 349 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-23 | 82 | 349 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |