Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 30147.m014363 |
Family | CE8 |
Protein Properties | Length: 366 Molecular Weight: 39835.4 Isoelectric Point: 8.421 |
Chromosome | Chromosome/Scaffold: 30147 Start: 1543116 End: 1544559 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 73 | 356 | 0 |
KVRLDGSGDFKSVTDALKSIPSGNEHRVIVDIGAGVYTEKVIIDRIKPFVTLLGSSNPMPTLQFDGTAKKYGTVYSATLTVEADYFVAANIIIKNTAPRP DGRAGAQAVALRVAGDKTAFYNCRILGFQDTVCDDKGRHFFKDCYIEGTVDFIFGSGKSLYLKTNLNVIKEKFMTVITAQAKHTSSEDSGFSFVHSNIAG DATDAYLGRAWMEMPEVVFSYSKMSNVVIPAGWSNYNHPEREKNIFFAEYKCSGPGANPSGRAKFSKQLSDSEAKSFISLGYIQ |
Full Sequence |
---|
Protein Sequence Length: 366 Download |
MAKQITYIGA IHYVIAATLL AATTVISDDA TPIPAAEDQI NSWFQANVKP FSSRKGTLDP 60 ALEAAETAPK RIKVRLDGSG DFKSVTDALK SIPSGNEHRV IVDIGAGVYT EKVIIDRIKP 120 FVTLLGSSNP MPTLQFDGTA KKYGTVYSAT LTVEADYFVA ANIIIKNTAP RPDGRAGAQA 180 VALRVAGDKT AFYNCRILGF QDTVCDDKGR HFFKDCYIEG TVDFIFGSGK SLYLKTNLNV 240 IKEKFMTVIT AQAKHTSSED SGFSFVHSNI AGDATDAYLG RAWMEMPEVV FSYSKMSNVV 300 IPAGWSNYNH PEREKNIFFA EYKCSGPGAN PSGRAKFSKQ LSDSEAKSFI SLGYIQGCKW 360 LLPPPS |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 8.0e-81 | 77 | 363 | 296 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-84 | 70 | 361 | 303 | + pectinesterase | ||
PLN02432 | PLN02432 | 3.0e-85 | 72 | 361 | 290 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-110 | 28 | 363 | 345 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 4 | 366 | 365 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 6.02558e-44 | 63 | 361 | 1 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8e-37 | 74 | 361 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 7e-23 | 82 | 349 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 7e-23 | 82 | 349 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 7e-23 | 82 | 349 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |