CAZyme Information

Basic Information
SpeciesRicinus communis
Cazyme ID30150.m000470
FamilyGT4
Protein PropertiesLength: 484 Molecular Weight: 54430.7 Isoelectric Point: 8.9141
ChromosomeChromosome/Scaffold: 30150 Start: 82166 End: 83620
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43024364.9e-25
  GIAGRLVRDKGHPLLYEAFSMILKRHPNVCLLVAGSGPWGRRYAELGPNVKVLGALESSQLSEFYNAIDVFVNPTLRPQGLDLTLIEAMHCGKPVLAPNY
  PSIVGTVVVDENFGYTFSPNVKSLVEALELVIRDG
Full Sequence
Protein Sequence     Length: 484     Download
MGFKHQTHKT TSSSNSFSVR FSTILILTLF FTSFYLFISP LRHVNQEPTI FPGKTTSFSG    60
DLRDAKFPWN KLSFGPTFEK LKLAVFSKTW PIGAAPGGME RHASTLYHAL AARGHEIHVF    120
TVPSDRKPHV DVHVGNLHVY FAANDHGSVN CSLAFEIFNK VNSNGAFDYV HTESVSLPHW    180
RAKMVPNLAV TWHGIWYEIM HSKLFEELFS NPNGFLPGPM TELQESMPRL LDEIRFFSSY    240
KQHICISNSA GEVLVNIYQL PQRNVHVILN GVDNTKFVHN PEAGTRFRRR YGILDDVSLV    300
MGIAGRLVRD KGHPLLYEAF SMILKRHPNV CLLVAGSGPW GRRYAELGPN VKVLGALESS    360
QLSEFYNAID VFVNPTLRPQ GLDLTLIEAM HCGKPVLAPN YPSIVGTVVV DENFGYTFSP    420
NVKSLVEALE LVIRDGPVLL QKKGMACKEY ALSMFTATKM AAAYERFFLC MKTSRYCQYP    480
FPTD 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR00032argG4.0e-3397466392+
COG0438RfaG1.0e-3582468395+
cd03798GT1_wlbH_like3.0e-3897466408+
cd03807GT1_WbnK_like2.0e-39228468253+
cd03801GT1_YqgM_like1.0e-6482468400+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAD55663.102447528476AC008017_36 Hypothetical protein [Arabidopsis thaliana]
RefSeqNP_177459.102448428485glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_001769489.10584847444predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_002317369.1014841483predicted protein [Populus trichocarpa]
RefSeqXP_002524261.1014841484glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3okp_A0.0000000001270398170308A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
PDB3okc_A0.0000000001270398170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form)
PDB3oka_B0.0000000001270398170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3oka_A0.0000000001270398170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB2f9f_A0.00000434043568162A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
Transmembrane Domains
StartEnd
1739
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JZ00855424842510
AM7324152841624440
FG1633432442364790
GR1862222611744330
CO9850292252564800
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis29827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny