| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30157.m000802 |
| Family | GH17 |
| Protein Properties | Length: 463 Molecular Weight: 50999.3 Isoelectric Point: 9.5193 |
| Chromosome | Chromosome/Scaffold: 30157 Start: 286613 End: 288363 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 28 | 351 | 0 |
| IGINYGQLGDNLPSPYRSIQILQSMNTGRVKLYDANPEILRLLAGTKIQVSVMVPNNEINNIASNQTIAHNWVRENVLQYYPNTMIRFILVGNEILSYSS DQDKKIWSNLVPAMRKIKNSLRSHNIQNIKVGTPLAMDVLQTTSPPSNGTFRSDISGTVILPLLKFLNGTKSFFFIDVYPYFPFSSNPTSISLDYALFKS SQNYTDLRTGLIYHNLLDQMLDSLVFAMTKLNYSNIRLAIAETGWPNAGDLDQPGANIYNAATYNRNLIKKMTAKPPIGTPARPGVVIPTFIFSLYNENR KTGPGTERHWGLLNANGTAIYEID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 463 Download |
| MATNMGVVAV IFLFSLVASS NAETSNKIGI NYGQLGDNLP SPYRSIQILQ SMNTGRVKLY 60 DANPEILRLL AGTKIQVSVM VPNNEINNIA SNQTIAHNWV RENVLQYYPN TMIRFILVGN 120 EILSYSSDQD KKIWSNLVPA MRKIKNSLRS HNIQNIKVGT PLAMDVLQTT SPPSNGTFRS 180 DISGTVILPL LKFLNGTKSF FFIDVYPYFP FSSNPTSISL DYALFKSSQN YTDLRTGLIY 240 HNLLDQMLDS LVFAMTKLNY SNIRLAIAET GWPNAGDLDQ PGANIYNAAT YNRNLIKKMT 300 AKPPIGTPAR PGVVIPTFIF SLYNENRKTG PGTERHWGLL NANGTAIYEI DLSGKQADSE 360 YRALPQPNNN KPYKGKLWCI AAQGADLTEL GTAVTFACSQ GNGTCDALAP GGKVAVATSM 420 DLQSRPPPIL VMDHANSLAS LSEDFRFKLK IYSDSAKLQA VYR |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.005 | 261 | 343 | 88 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-5 | 377 | 412 | 36 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-6 | 377 | 412 | 36 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-110 | 28 | 351 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64490.1 | 0 | 25 | 446 | 34 | 445 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| EMBL | CAN60692.1 | 0 | 5 | 397 | 1 | 392 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI39470.1 | 0 | 1 | 420 | 1 | 420 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002298669.1 | 0 | 10 | 414 | 1 | 409 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520622.1 | 0 | 1 | 463 | 1 | 463 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 28 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 27 | 353 | 1 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 27 | 353 | 1 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 27 | 353 | 1 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 27 | 353 | 1 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
