Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30170.m013644 |
Family | CBM22 |
Protein Properties | Length: 830 Molecular Weight: 93813.4 Isoelectric Point: 6.2178 |
Chromosome | Chromosome/Scaffold: 30170 Start: 260351 End: 264497 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 113 | 249 | 9e-29 |
NIILNPRFGDGLNNWSSKGCKIELHESMVDGKIIPQSGKVFASATERTEKWNGIEQEITGRVLHHVAYQVTAVVRIYSDNVTSAAVQATLWVQEQDLREE YLAIANLQVTDNDWVQLQGEFLLNASPSRAIIYLEGP | |||
CBM22 | 284 | 425 | 4.2e-38 |
NIVDNSNLDDGTTGWFPLGNCALSTETGSPRVLPPMARESLGPNKPLSGRYILVTNRSDSWMGPAQMITDKLKLYLTYQVSAWVRIGAGATGFQILNVAL GMDGEWINGGEIESSDNKWHEIGGSFRIEKQPSNVMVYVQGP | |||
GH10 | 481 | 758 | 0 |
VEQTQNSFPLGSCITRTSMDNDAFVKFLVKNFNWVVFENEMKWSWTEPQEGKFNYKETDELVDWCKSHNMEMRGHCIFWEMEYAIQSWVRSLNGIDLMTA VQNRLTDLLTRYKGKFRHYDVNNEMLHGSFYQDRLGKDIRANMFKTAHQLDPSATLFVNDYHIEDGSDIRSTPEKYIQQILELQEQGAPVGAIGIQAHID VPVGPIVSSALDKLGTLGLPIWFTELDVSSANEYIRAEDLEVMLREAYAHPAVEGVILWGFWELYMSRTYAHLVNADG |
Full Sequence |
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Protein Sequence Length: 830 Download |
MESLESRGFC FFQWTVWFLP WLSFLLWFCF LEVLQNQFLC PINCSSGERA AAASHFVASS 60 PFDYMGHDTE ALCLQQTTHS RMPSTNHLYI QSHSSVRTRT SARRSHNAVG EDNIILNPRF 120 GDGLNNWSSK GCKIELHESM VDGKIIPQSG KVFASATERT EKWNGIEQEI TGRVLHHVAY 180 QVTAVVRIYS DNVTSAAVQA TLWVQEQDLR EEYLAIANLQ VTDNDWVQLQ GEFLLNASPS 240 RAIIYLEGPP PGTDILINSL NVKHAEKISA SARPVSKDVP FGMNIVDNSN LDDGTTGWFP 300 LGNCALSTET GSPRVLPPMA RESLGPNKPL SGRYILVTNR SDSWMGPAQM ITDKLKLYLT 360 YQVSAWVRIG AGATGFQILN VALGMDGEWI NGGEIESSDN KWHEIGGSFR IEKQPSNVMV 420 YVQGPASGVD LMVAGLQIFP VNRKARFKYL KKQTEKIRKR DIILKFSGSE TSNFLGNFVK 480 VEQTQNSFPL GSCITRTSMD NDAFVKFLVK NFNWVVFENE MKWSWTEPQE GKFNYKETDE 540 LVDWCKSHNM EMRGHCIFWE MEYAIQSWVR SLNGIDLMTA VQNRLTDLLT RYKGKFRHYD 600 VNNEMLHGSF YQDRLGKDIR ANMFKTAHQL DPSATLFVND YHIEDGSDIR STPEKYIQQI 660 LELQEQGAPV GAIGIQAHID VPVGPIVSSA LDKLGTLGLP IWFTELDVSS ANEYIRAEDL 720 EVMLREAYAH PAVEGVILWG FWELYMSRTY AHLVNADGKI NVAGKRFLAL RKEWLSHANG 780 HINEQGEFRF RGFRGTYNIE INSSSKKVNK TIVVDQGELP LVVSIDLQDF |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 3.0e-12 | 113 | 253 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 2.0e-13 | 284 | 428 | 152 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 3.0e-40 | 506 | 741 | 257 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
smart00633 | Glyco_10 | 7.0e-81 | 521 | 767 | 268 | + Glycosyl hydrolase family 10. | ||
pfam00331 | Glyco_hydro_10 | 6.0e-83 | 486 | 769 | 304 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283550.1 | 5e-37 | 91 | 493 | 80 | 458 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002283550.1 | 0 | 108 | 827 | 262 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301133.1 | 0 | 95 | 827 | 317 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 112 | 438 | 1 | 314 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510024.1 | 0 | 1 | 830 | 1 | 830 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 5e-34 | 497 | 740 | 28 | 268 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1i1w_A | 5e-34 | 497 | 740 | 28 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 1e-33 | 497 | 740 | 28 | 268 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1k6a_A | 5e-33 | 497 | 740 | 28 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
PDB | 1gor_A | 5e-33 | 497 | 740 | 28 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |