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Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30170.m013645 |
Family | CBM22 |
Protein Properties | Length: 644 Molecular Weight: 71063.6 Isoelectric Point: 6.9225 |
Chromosome | Chromosome/Scaffold: 30170 Start: 266351 End: 269510 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 186 | 322 | 1.3e-30 |
NIILNPKFEDGLNNWSGRGCKVVLHDSMEDGKIVPMSGKVFASATERTQSWNGIQQEITGRVQRKLAYEAIALVRIFGNNVTNADVRATLWVQTPDFREQ YIGIANLQATDKDWVQLQGKFLLNGSPKRVVIYIEGP | |||
CBM22 | 19 | 156 | 7.9e-33 |
NIIINHDFSEGLHSWHPNCCDGFVVSAESCHPGFLPNSGGKYAAVSNRKECWQGLEQDITSRVSPGSSYSVSACVGVSGPFQGPSDVLATLKLEYRDLPT DFLFIGKTCVSKERWEKLEGTFSLSTMPNRVVFYLEGP | |||
CBM22 | 357 | 498 | 4.34403e-44 |
NIIQNSNLNDGTNVWFPLGNCTLSVATGSPHILPPMARESLGPHQPLSGRYILVTKRTQTWMGPAQMITDKIKLFLTYQVSAWVKIGSGATGPQNVNVAL GVDNQWVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYVQGP |
Full Sequence |
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Protein Sequence Length: 644 Download |
MIKIGNPMMT SSSSDNAGNI IINHDFSEGL HSWHPNCCDG FVVSAESCHP GFLPNSGGKY 60 AAVSNRKECW QGLEQDITSR VSPGSSYSVS ACVGVSGPFQ GPSDVLATLK LEYRDLPTDF 120 LFIGKTCVSK ERWEKLEGTF SLSTMPNRVV FYLEGPSPGV DLLIDSVIIT CSSQSECDDG 180 GDGDQNIILN PKFEDGLNNW SGRGCKVVLH DSMEDGKIVP MSGKVFASAT ERTQSWNGIQ 240 QEITGRVQRK LAYEAIALVR IFGNNVTNAD VRATLWVQTP DFREQYIGIA NLQATDKDWV 300 QLQGKFLLNG SPKRVVIYIE GPPAGTDILV NSFVVKHAEK IPPSPPPLIE NPAYGVNIIQ 360 NSNLNDGTNV WFPLGNCTLS VATGSPHILP PMARESLGPH QPLSGRYILV TKRTQTWMGP 420 AQMITDKIKL FLTYQVSAWV KIGSGATGPQ NVNVALGVDN QWVNGGQVEI NDDRWHEIGG 480 SFRIEKQPSK VMVYVQGPAP GIDLMLAGLQ IFPVDREARF RHLKRQTDKI RKCDVTLKFS 540 GVDSHSLLGT FVKVKQTQNS FPFGSCISRT NIDNEDYVDF FVKNFNWAVF GNELKWYWTE 600 AQQGNFNYRD ADEMLDLCKK TTSRPGVTVS SGKWKAPSSH GLRL 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00633 | Glyco_10 | 1.0e-5 | 594 | 620 | 27 | + Glycosyl hydrolase family 10. | ||
pfam02018 | CBM_4_9 | 7.0e-13 | 18 | 158 | 142 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam00331 | Glyco_hydro_10 | 9.0e-16 | 559 | 620 | 63 | + Glycosyl hydrolase family 10. | ||
pfam02018 | CBM_4_9 | 3.0e-16 | 186 | 326 | 142 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 2.0e-16 | 356 | 500 | 151 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33301.1 | 0 | 9 | 620 | 20 | 635 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002301133.1 | 0 | 9 | 620 | 154 | 769 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 19 | 506 | 2 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 186 | 511 | 2 | 314 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510025.1 | 0 | 1 | 644 | 1 | 644 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG219265 | 255 | 243 | 495 | 0 |
EY666462 | 240 | 357 | 596 | 0 |
JG219265 | 235 | 103 | 319 | 0.000000000000003 |
EY666462 | 156 | 186 | 330 | 0.0000000002 |
EY666462 | 160 | 19 | 169 | 0.00000006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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