Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30170.m013646 |
Family | GH10 |
Protein Properties | Length: 251 Molecular Weight: 28270.9 Isoelectric Point: 4.9096 |
Chromosome | Chromosome/Scaffold: 30170 Start: 269525 End: 270280 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 3 | 181 | 2.8026e-44 |
AVQNRLTGLLNRYKGKFRHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDPSATLFVNDYHIEDGDDARSSPEKYIEQILNLQEQGAPVGGIGIQGHI DSPVGPIVCSALDKLGILGLPIWFTELDVSSINEYVRGEDLEVILREAFAHPAVDGIMLWGFWELFMSRDNAHLVNAEG |
Full Sequence |
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Protein Sequence Length: 251 Download |
MTAVQNRLTG LLNRYKGKFR HYDVNNEMLH GSFYQDRLGK DIRANMFKTA NQLDPSATLF 60 VNDYHIEDGD DARSSPEKYI EQILNLQEQG APVGGIGIQG HIDSPVGPIV CSALDKLGIL 120 GLPIWFTELD VSSINEYVRG EDLEVILREA FAHPAVDGIM LWGFWELFMS RDNAHLVNAE 180 GELNEAGKRY LALKDEWLTR AHGHIEEQGE FTFRGFQGTY KLEINTISKK ITKTFVVDKG 240 DSPVVVSIDL N |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 3.0e-20 | 3 | 164 | 181 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 2.0e-48 | 1 | 194 | 211 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 9.0e-59 | 1 | 189 | 207 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33301.1 | 0 | 1 | 250 | 666 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
GenBank | ABD47727.1 | 0 | 1 | 250 | 60 | 309 | endo-1,4-beta-xylanase [Eucalyptus globulus subsp. globulus] |
RefSeq | XP_002283550.1 | 0 | 1 | 250 | 732 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301133.1 | 0 | 1 | 250 | 800 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510026.1 | 0 | 1 | 251 | 1 | 251 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 7e-18 | 4 | 163 | 108 | 268 | A Chain A, Crystal Structure Of The Extracellular Xylanase From Geobacillus Stearothermophilus T-6 (Xt6, Monoclinic Form): The E159aE265A MUTANT AT 1.8A RESOLUT |
PDB | 1i1w_A | 7e-18 | 4 | 163 | 108 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 1e-17 | 4 | 163 | 108 | 268 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1xyz_B | 2e-17 | 1 | 164 | 129 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1xyz_A | 2e-17 | 1 | 164 | 129 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR931361 | 250 | 1 | 250 | 0 |
DR924365 | 247 | 4 | 250 | 0 |
FC918981 | 251 | 1 | 251 | 0 |
FQ324200 | 250 | 1 | 250 | 0 |
DY306813 | 251 | 1 | 251 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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