y
Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 30170.m014108 |
Family | GH35 |
Protein Properties | Length: 846 Molecular Weight: 93648.4 Isoelectric Point: 8.1123 |
Chromosome | Chromosome/Scaffold: 30170 Start: 2887062 End: 2891943 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 36 | 338 | 0 |
IINGQRRILISGSIHYPRSTPEMWEDLIQKAKDGGLDVIDTYVFWDVHETSPGNYNFDGRYDLVRFIKTVQKVGLYAHLRIGPYVCAEWNFGGFPVWLKY VPGISFRTDNEPFKAAMQGFTQKIVQMMKNENLFASQGGPIILSQIENEYGPESRALGAAGRSYINWAAKMAVGLDTGVPWVMCKEDDAPDPMINTCNGF YCDAFAPNKPYKPTLWTEAWSGWFTEFGGPIHQRPVEDLAFAVARFIQKGGSYFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYGHLKA LHK |
Full Sequence |
---|
Protein Sequence Length: 846 Download |
METNSVSKLL TFFLMVLLMG SKLVQCTVTY DKKAIIINGQ RRILISGSIH YPRSTPEMWE 60 DLIQKAKDGG LDVIDTYVFW DVHETSPGNY NFDGRYDLVR FIKTVQKVGL YAHLRIGPYV 120 CAEWNFGGFP VWLKYVPGIS FRTDNEPFKA AMQGFTQKIV QMMKNENLFA SQGGPIILSQ 180 IENEYGPESR ALGAAGRSYI NWAAKMAVGL DTGVPWVMCK EDDAPDPMIN TCNGFYCDAF 240 APNKPYKPTL WTEAWSGWFT EFGGPIHQRP VEDLAFAVAR FIQKGGSYFN YYMYHGGTNF 300 GRSAGGPFIT TSYDYDAPID EYGLIREPKY GHLKALHKAI KLCEHALVSS DPSITSLGTY 360 QQAHVFSSGR SCAAFLANYN AKSAARVMFN NMHYDLPPWS ISILPDCRNV VFNTARVGAQ 420 TLRMQMLPTG SELFSWETYD EEISSLTDSS RITALGLLEQ INVTRDTSDY LWYLTSVDIS 480 PSEAFLRNGQ KPSLTVQSAG HGLHVFINGQ FSGSAFGTRE NRQLTFTGPV NLRAGTNRIA 540 LLSIAVGLPN VGLHYETWKT GVQGPVLLNG LNQGKKDLTW QKWSYQVGLK GEAMNLVSPN 600 GVSSVDWIEG SLASSQGQAL KWHKAYFDAP RGNEPLALDM RSMGKGQVWI NGQSIGRYWM 660 AYAKGDCNSC SYIWTFRPSK CQLGCGEPTQ RWYHVPRSWL KPTKNLLVVF EELGGDASKI 720 SLVKRSIEGV CADAYEHHPA TKNYNTGGND ESSKLHQAKI HLRCAPGQFI AAIKFASFGT 780 PSGTCGSFQQ GTCHAPNTHS VIEKKCIGQE SCMVTISNSN FGADPCPNVL KKLSVEAVCS 840 TGTTTS 900 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.009 | 50 | 186 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-19 | 28 | 330 | 361 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 9.0e-26 | 762 | 839 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 6.0e-167 | 34 | 340 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 1 | 840 | 843 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK81874.1 | 0 | 1 | 846 | 1 | 848 | putative beta-galactosidase BG1 [Vitis vinifera] |
EMBL | CAN78072.1 | 0 | 1 | 846 | 1 | 848 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280715.1 | 0 | 1 | 846 | 1 | 848 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306893.1 | 0 | 1 | 846 | 1 | 847 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510455.1 | 0 | 1 | 846 | 1 | 846 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 23 | 336 | 3 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4.00001e-41 | 28 | 409 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4.00001e-41 | 28 | 409 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |