Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30174.m009116 |
Family | CBM43 |
Protein Properties | Length: 198 Molecular Weight: 19608.8 Isoelectric Point: 4.7671 |
Chromosome | Chromosome/Scaffold: 30174 Start: 3121463 End: 3123928 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 100 | 2.3e-31 |
CICKDGVGDTQLQKALDYACGAGADCTPILQNGACYQPNTVKDHCSYAVNSYYQRKGQVAGSCDFSSTATTSTSPPSTA |
Full Sequence |
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Protein Sequence Length: 198 Download |
MAVLVCLVLF LALTGQSSAL YCICKDGVGD TQLQKALDYA CGAGADCTPI LQNGACYQPN 60 TVKDHCSYAV NSYYQRKGQV AGSCDFSSTA TTSTSPPSTA TSTCVYPASS STAGTSTTPT 120 TGATPGTSTG TGTGTGTGTG TGTGTGTTAG VTPTPFVGLG PTGSGTGLDN NDVTSIAGTT 180 KLFFASLTSG LIFLLLWV |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam07983 | X8 | 2.0e-21 | 20 | 86 | 72 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. |
smart00768 | X8 | 3.0e-30 | 20 | 86 | 67 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14053.1 | 0 | 1 | 115 | 1 | 114 | unknown [Glycine max] |
GenBank | ACU19899.1 | 0 | 1 | 115 | 1 | 114 | unknown [Glycine max] |
GenBank | ACU20773.1 | 0 | 1 | 115 | 1 | 114 | unknown [Glycine max] |
RefSeq | XP_002311337.1 | 0 | 1 | 197 | 1 | 183 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512089.1 | 0 | 1 | 198 | 1 | 198 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 6e-21 | 14 | 111 | 6 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |