| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30174.m009136 |
| Family | GT35 |
| Protein Properties | Length: 973 Molecular Weight: 111003 Isoelectric Point: 5.0444 |
| Chromosome | Chromosome/Scaffold: 30174 Start: 3238489 End: 3244180 |
| Description | Glycosyl transferase, family 35 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT35 | 166 | 967 | 0 |
| ALKKLGHNLEDVARQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAESWLEMGNPWEIVRNDVSYPVKFYGKVILKP DGSKEWIGGENILAVAYDVPIPGYKTKTTINLRLWSTKVSPQEFDLSAFNTGDHAKAYAAVKNAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDII AHFERRSGEAVKWENFPDKVAVQMNDTHPTLCIPELIRILMDVKGLSWDKAWNITRRTVAYTNHTVLPEALEKWSLDLLQELLPRHIEIIKMIDEELIHT IIAEYGMEDLDLLEQKLKEMRILDNVELPESVVQLLVKSDKSFAVESVIEDIEVEDSEQETKSTAEDKHTEEKKDEEEEEEEEEEEEEEGEEKNEVTFKV DPAQPKFVRMANLCVVGGNTVNGVAEIHSEIVKNEVFNDFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSKILTKWIGTDDWVLNTEKLMALKQFADNVDL QTEWREAKRKNKMKVAAFLKEKTGYTVNPDVLFDVQIKRIHEYKRQLLNILGIVYRYKQMKEMSAEERKERYVPRVCIFGGKAFATYVQAKRMVKFITDV GAIVNHDPEIGDLLKVVFVPDYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFAMNGCLLIGTLDGANVEIREEVGEENFFLFGARAHEIAGLRKERA EGKFVADPRFEEVKAFVRSGVFGSYNYDELMGSLEGNEGYGRADYFLVGKDFPSYLECQEKVDEAYRDQKKWTRMSILNTAGSFKFSSDRTIREYAKDIW RI | |||
| Full Sequence |
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| Protein Sequence Length: 973 Download |
| MANLPFPTAK SNSRFSSTFI DFNYGTAHSK LFFIRSPQRF SRSRTRTLSV KNIASDQRQQ 60 DLQEHITQGD SLASFIPDSA SIASSIKYHA EFTPSFSPEH FELPKAFVAT AESVRDSLII 120 NWNATYDYYA KIHVKQAYYL SMEFLQGRAL LNAIGNLELS GAYAEALKKL GHNLEDVARQ 180 EPDAALGNGG LGRLASCFLD SLATLNYPAW GYGLRYKYGL FKQLITKDGQ EEVAESWLEM 240 GNPWEIVRND VSYPVKFYGK VILKPDGSKE WIGGENILAV AYDVPIPGYK TKTTINLRLW 300 STKVSPQEFD LSAFNTGDHA KAYAAVKNAE KICYILYPGD ESIEGKTLRL KQQYTLCSAS 360 LQDIIAHFER RSGEAVKWEN FPDKVAVQMN DTHPTLCIPE LIRILMDVKG LSWDKAWNIT 420 RRTVAYTNHT VLPEALEKWS LDLLQELLPR HIEIIKMIDE ELIHTIIAEY GMEDLDLLEQ 480 KLKEMRILDN VELPESVVQL LVKSDKSFAV ESVIEDIEVE DSEQETKSTA EDKHTEEKKD 540 EEEEEEEEEE EEEEGEEKNE VTFKVDPAQP KFVRMANLCV VGGNTVNGVA EIHSEIVKNE 600 VFNDFYKLWP EKFQNKTNGV TPRRWIRFCN PDLSKILTKW IGTDDWVLNT EKLMALKQFA 660 DNVDLQTEWR EAKRKNKMKV AAFLKEKTGY TVNPDVLFDV QIKRIHEYKR QLLNILGIVY 720 RYKQMKEMSA EERKERYVPR VCIFGGKAFA TYVQAKRMVK FITDVGAIVN HDPEIGDLLK 780 VVFVPDYNVS VAEVLIPGSE LSQHISTAGM EASGTSNMKF AMNGCLLIGT LDGANVEIRE 840 EVGEENFFLF GARAHEIAGL RKERAEGKFV ADPRFEEVKA FVRSGVFGSY NYDELMGSLE 900 GNEGYGRADY FLVGKDFPSY LECQEKVDEA YRDQKKWTRM SILNTAGSFK FSSDRTIREY 960 AKDIWRIDPV LLP |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00343 | Phosphorylase | 3.0e-132 | 166 | 470 | 305 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 570 | 967 | 407 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 83 | 463 | 385 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| pfam00343 | Phosphorylase | 0 | 565 | 969 | 410 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| TIGR02093 | P_ylase | 0 | 571 | 967 | 402 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004645 | phosphorylase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27267.1 | 0 | 20 | 973 | 26 | 933 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274575.1 | 0 | 20 | 973 | 26 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316098.1 | 0 | 1 | 973 | 1 | 953 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512108.1 | 0 | 1 | 973 | 1 | 973 | glycogen phosphorylase, putative [Ricinus communis] |
| RefSeq | XP_002526085.1 | 0 | 17 | 973 | 21 | 977 | glycogen phosphorylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2azd_B | 0 | 550 | 966 | 383 | 793 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2azd_B | 0 | 135 | 459 | 59 | 375 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2azd_A | 0 | 550 | 966 | 383 | 793 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2azd_A | 0 | 135 | 459 | 59 | 375 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2aw3_B | 0 | 550 | 966 | 383 | 793 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO797178 | 400 | 574 | 973 | 0 |
| HO778303 | 400 | 574 | 973 | 0 |
| HO778303 | 402 | 106 | 507 | 0 |
| HO620767 | 401 | 573 | 973 | 0 |
| HO778303 | 90 | 25 | 108 | 0.000000003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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