Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30190.m011203 |
Family | GT47 |
Protein Properties | Length: 567 Molecular Weight: 65223.4 Isoelectric Point: 7.7985 |
Chromosome | Chromosome/Scaffold: 30190 Start: 2497619 End: 2499322 |
Description | root hair specific 8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 182 | 505 | 0 |
CDGRGIYVYDLPSKFNKDLLGQCREMIPWTDFCKYFDNEAFGKPIEKLGKGWYLTHQYSLEPIFHSRILKHPCRVYNENEAKLFYVPYYGGLDILRWHFK NVSNDVKDTLALELLKWLESRKTWLQNSGKDHVFVLGKISWDFRRKIDSSWGTRFLQLQQMQNPVKLLIERQPWDVNDIGIPHPTFFHPHSDDDIVAWQL KIIRTTRKNLLTFAGAARPDQPESIRSILINQCTSAGDKCKFLNCKSGGCDRPETIIELFAESEFCLQPPGDSPTRKSVFDSLISGCIPVLFNPFTAYYQ YPWHLPEDHSKYSVFIDQEEVRQM |
Full Sequence |
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Protein Sequence Length: 567 Download |
MAISMSRKKS RASKKAERQE LCSCFTIWFK LLYRIPAVAV LLILIFLWSS STTIISGNIV 60 HVCISSRKLN NLYCLSAGSQ PNFEIPIPSV NNSSISSSLN GILDDNSSTN GSVSNENTLV 120 SSVTTNKNVN EIVNDVKEEP NLTVTERINN NRDEELENAK KVVKEELQLH RSWMSNTNPA 180 ACDGRGIYVY DLPSKFNKDL LGQCREMIPW TDFCKYFDNE AFGKPIEKLG KGWYLTHQYS 240 LEPIFHSRIL KHPCRVYNEN EAKLFYVPYY GGLDILRWHF KNVSNDVKDT LALELLKWLE 300 SRKTWLQNSG KDHVFVLGKI SWDFRRKIDS SWGTRFLQLQ QMQNPVKLLI ERQPWDVNDI 360 GIPHPTFFHP HSDDDIVAWQ LKIIRTTRKN LLTFAGAARP DQPESIRSIL INQCTSAGDK 420 CKFLNCKSGG CDRPETIIEL FAESEFCLQP PGDSPTRKSV FDSLISGCIP VLFNPFTAYY 480 QYPWHLPEDH SKYSVFIDQE EVRQMKVNAV ERLMNVSIKE REDMRRYIVY ELLPGLVYGD 540 SSSQLDKFQD AFSITVNNLL ERVNRLQ |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-71 | 181 | 502 | 337 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |