| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30190.m011324 |
| Family | CBM57 |
| Protein Properties | Length: 629 Molecular Weight: 68971.1 Isoelectric Point: 7.5971 |
| Chromosome | Chromosome/Scaffold: 30190 Start: 200865 End: 205648 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 216 | 365 | 9.6e-26 |
| DYSGDRWGGDRFWSRMTTFGQGSDKAISTENSIKKASNAPNFYPESLYQTALVSTDTQPDLAYTMDVDPNKNYSVWLHFAEIDVSITGVGKRIFDILING DVEFEAVDITKMSGGRYTALVLNTTVAVNGRTLTITLRPKEGNHAIVNAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 629 Download |
| MLRFVIVQSC SLVFFLAFST CLAKPGPWVM RISCGARVNV HSPPTNTLWY KDFAYTGGIP 60 TNASLTSYVA PPLSTLRYFP LSEGPNNCYN IKRVPKGHYS VRVFYALVAH HDPDPNSDNE 120 PLFDISVEGT QIYSLQSGWS SHDDRVFTEA QVFLTDGTAS ICFHSTGHGD PAILSIEILQ 180 VDDRSYFFGP EWGQGVILRT ATRFSCGNGK SKFDVDYSGD RWGGDRFWSR MTTFGQGSDK 240 AISTENSIKK ASNAPNFYPE SLYQTALVST DTQPDLAYTM DVDPNKNYSV WLHFAEIDVS 300 ITGVGKRIFD ILINGDVEFE AVDITKMSGG RYTALVLNTT VAVNGRTLTI TLRPKEGNHA 360 IVNAIEVFEV ITAESKTLLD EVRALQTLKS ALGLPLRFGW NGDPCVPQQH PWTGADCQFD 420 RTISKWVIDG LGLDNQGLRG FLPNDMSKFH HLQSINLSTN SIHGAIPLSI GSITSLEVLD 480 LSYNFFNGSI PESIGQLTSL RRLNLNGNSL SGRVPAALGG RLLHGASFNF TDNAGLCGIP 540 GLRACGPHLS AGAKIGIAFG ASVAFLFMVI CSMCWWKRRQ NILRAQQIAA RGAPYAKART 600 HNAHDIQMTR HYNHGHARTA AENGPSLLS |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 7.0e-5 | 29 | 176 | 163 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 2.0e-9 | 431 | 520 | 90 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 4.0e-16 | 203 | 365 | 175 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 2.0e-68 | 32 | 370 | 352 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 2 | 629 | 630 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 27 | 629 | 24 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 23 | 629 | 22 | 626 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002279791.1 | 0 | 30 | 629 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 30 | 629 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 1 | 629 | 1 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.000000000002 | 419 | 552 | 628 | 755 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 3rgz_A | 0.000000006 | 427 | 518 | 467 | 558 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 3rgz_A | 0.00000004 | 425 | 518 | 393 | 486 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 3rgz_A | 0.0000005 | 438 | 519 | 454 | 535 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
