Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30193.m000718 |
Family | GH35 |
Protein Properties | Length: 803 Molecular Weight: 89885.9 Isoelectric Point: 8.1176 |
Chromosome | Chromosome/Scaffold: 30193 Start: 471264 End: 484305 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 339 | 0 |
LIIDGQRKLLISAAIHYPRSVPGMWPELVQTAKEGGVDVIETYVFWNGHEPSPSNYYFEKRYDLVKFVKIVQQAGMYLILRIGPFVAAEWNFGGVPVWLH YVPGTVFRTDNYNFKYHMQKFMTYIVNLMKKEKLFASQGGPIILAQVENEYGFYESAYGEGGKRYAMWAAQMAVSQNIGVPWIMCQQFDAPNSVINTCNS FYCDQFKPIFPDKPKIWTENWPGWFQTFGAPNPHRPAEDIAFSVARFFQKGGSVQNYYMYHGGTNFGRTSGGPFITTSYDYEAPIDEYGLARLPKWAHLK ELHK |
Full Sequence |
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Protein Sequence Length: 803 Download |
MSTILLQLSS LSFFFFFFLS FTLCCGGNIT YDSRSLIIDG QRKLLISAAI HYPRSVPGMW 60 PELVQTAKEG GVDVIETYVF WNGHEPSPSN YYFEKRYDLV KFVKIVQQAG MYLILRIGPF 120 VAAEWNFGGV PVWLHYVPGT VFRTDNYNFK YHMQKFMTYI VNLMKKEKLF ASQGGPIILA 180 QVENEYGFYE SAYGEGGKRY AMWAAQMAVS QNIGVPWIMC QQFDAPNSVI NTCNSFYCDQ 240 FKPIFPDKPK IWTENWPGWF QTFGAPNPHR PAEDIAFSVA RFFQKGGSVQ NYYMYHGGTN 300 FGRTSGGPFI TTSYDYEAPI DEYGLARLPK WAHLKELHKA IKLCELTLLN SVPVNLSLGP 360 SQEADVYAEE SGACAAFLAN MDEKNDKTVV FRNMSYHLPA WSVSILPDCK NVVFNTAKVN 420 SQTSIVEMVP DDLRSSDKGT KALKWETFVE NAGIWGTSDL VKNGFVDHIN TTKDTTDYLW 480 YTTSIFVGEN EEFLKKGGRP VLLIESKGHA LHAFVNQELQ GTASGNGTHS PFKFKKPVSL 540 VAGKNDIALL SMTVGLQNAG SFYEWVGAGL TSVKMKGFNN GTIDLSTFNW TYKIGLQGEK 600 LGMYNGIAVE TVNWVATSKP PKDQPLTWYK RQIHARQMLN WMWRINSEMI LVWTRYHVPR 660 SWFKPSGNIL VIFEEKGGDP TKITFSRRKI SGVCALVAED YPMANLESLE NAGSGSSNYK 720 ASVHLKCPKS SIISAIKFAS FGSPAGACGS YSEGECHDPK SISVVEKVCL NKNQCVVEVT 780 EENFSKGLCP GKMKKLAVEA VCS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02140 | Gal_Lectin | 7.0e-11 | 725 | 802 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-21 | 29 | 331 | 358 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-157 | 35 | 341 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 28 | 803 | 824 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF70823.1 | 0 | 28 | 803 | 45 | 870 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
DDBJ | BAD91080.1 | 0 | 28 | 803 | 28 | 851 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CBI21600.1 | 0 | 22 | 803 | 16 | 847 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002310540.1 | 0 | 10 | 803 | 2 | 827 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522927.1 | 0 | 1 | 803 | 1 | 803 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3.00004e-41 | 27 | 337 | 6 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-36 | 29 | 324 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-36 | 29 | 324 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 1e-36 | 29 | 324 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_A | 1e-36 | 29 | 324 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |