Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30204.m001791 |
Family | GT1 |
Protein Properties | Length: 626 Molecular Weight: 68472 Isoelectric Point: 6.3151 |
Chromosome | Chromosome/Scaffold: 30204 Start: 392861 End: 407795 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 187 | 595 | 0 |
IVGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFFPLGGDPKVLAGYMVKNKGFLPSGPSEIPTQRNQLKDIINSLLPACKEPDMDSGIP FKADAIIANPPAYGHSHVAEALKVPLHVFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMINDVRKKKLKLRPVTYLSGSQGYDSDIPH GYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPESLVKWLEAGPKPIYIGFGSLPVQEPEKMTQIIVHALEQTGQRGIINKGWGGLGNLAEPKDFIY LVDNCPHDWLFLQCKAVVHHGGAGTTAAGLKAACPTAIVPFFGDQPFWGERVHARGVGPVPIPVDEFSLHKLIDAIKFMLDPEVKERAVELAKAMENEDG VTGAVKAFF |
Full Sequence |
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Protein Sequence Length: 626 Download |
MAEENRRSSS SASSSSSYGE ASVRIEQEIG AGTSSDGKEL ETKAVVATSS SVNNNGCTDT 60 SSGTFGRDAT KLNTSKAEMP GANKLEPTSS GLKLERSKTE RQRPNILAEE AAQIFDDKIP 120 VQQKLKLLNR IATVKDDGTV EFDVPGDVAP QALSAGSDDV YNAFVDDEPV DATDLQYIPP 180 LQIVMLIVGT RGDVQPFIAI GKRLQDYGHR VRLATHSNFK EFVLTAGLEF FPLGGDPKVL 240 AGYMVKNKGF LPSGPSEIPT QRNQLKDIIN SLLPACKEPD MDSGIPFKAD AIIANPPAYG 300 HSHVAEALKV PLHVFFTMPW TPTSEFPHPL SRVKQPAGYR LSYQIVDSLI WLGIRDMIND 360 VRKKKLKLRP VTYLSGSQGY DSDIPHGYIW SPHLVPKPKD WGPKIDVVGF CFLDLASNYE 420 PPESLVKWLE AGPKPIYIGF GSLPVQEPEK MTQIIVHALE QTGQRGIINK GWGGLGNLAE 480 PKDFIYLVDN CPHDWLFLQC KAVVHHGGAG TTAAGLKAAC PTAIVPFFGD QPFWGERVHA 540 RGVGPVPIPV DEFSLHKLID AIKFMLDPEV KERAVELAKA MENEDGVTGA VKAFFKHLPR 600 KKPEPEPETS LEHSSFFSFS RCFGCS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03033 | Glyco_transf_28 | 6.0e-34 | 183 | 327 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
COG1819 | COG1819 | 2.0e-34 | 183 | 604 | 433 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
cd03784 | GT1_Gtf_like | 1.0e-121 | 183 | 597 | 415 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC22617.1 | 0 | 13 | 626 | 4 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
EMBL | CBI37267.1 | 0 | 1 | 626 | 1 | 615 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265023.1 | 0 | 1 | 626 | 48 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321244.1 | 0 | 77 | 625 | 2 | 552 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521125.1 | 0 | 1 | 626 | 1 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 8e-33 | 181 | 602 | 1 | 385 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3h4i_A | 8e-33 | 181 | 602 | 1 | 385 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1iir_A | 2e-22 | 425 | 603 | 230 | 403 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
PDB | 1rrv_B | 5e-22 | 181 | 603 | 1 | 404 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY295142 | 418 | 77 | 492 | 0 |
GT046352 | 335 | 190 | 524 | 0 |
GO883166 | 334 | 143 | 476 | 0 |
CX664063 | 295 | 280 | 574 | 0 |
GT046352 | 32 | 517 | 548 | 0.0004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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