y
Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 30221.m002222 |
Family | GH3 |
Protein Properties | Length: 777 Molecular Weight: 83603.1 Isoelectric Point: 6.6571 |
Chromosome | Chromosome/Scaffold: 30221 Start: 519252 End: 523093 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 89 | 338 | 0 |
SVSRLGIPKYEWWSEALHGVSYVGPGTHFSNIVPGATSFPQVILTAASFNASLFEAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGE DPLLSSKYGSCYVRGLQQTDNGDSERLKVAACCKHYTAYDLDNWKGTDRYHFNAVVTKQDLDDTFQPPFKSCVIDGNVASVMCSYNQVNGKPTCADPDLL AGIIRGEWKLNGYIVSDCDSVDVIYNSQHYTKTPEEAAAITILAGLDLNC |
Full Sequence |
---|
Protein Sequence Length: 777 Download |
MASVVENGAP NVSALLCLFL CFSLYVLSSR NQVLAQSSPV FACDVKSNPS LASFGFCNVS 60 LGISDRVTDL VNRLTLQEKI GFLVNSAGSV SRLGIPKYEW WSEALHGVSY VGPGTHFSNI 120 VPGATSFPQV ILTAASFNAS LFEAIGKVVS TEARAMYNVG LAGLTFWSPN INIFRDPRWG 180 RGQETPGEDP LLSSKYGSCY VRGLQQTDNG DSERLKVAAC CKHYTAYDLD NWKGTDRYHF 240 NAVVTKQDLD DTFQPPFKSC VIDGNVASVM CSYNQVNGKP TCADPDLLAG IIRGEWKLNG 300 YIVSDCDSVD VIYNSQHYTK TPEEAAAITI LAGLDLNCGS FLGKHTEAAV NAGLLNVSAV 360 DKAVSNNFAT LMRLGFFDGD PSKQLYGKLG PKDVCTAVNQ ELAREAARQG IVLLKNSPGS 420 LPLSPTAIKT LAVIGPNANV TKTMIGNYEG TPCKYTTPLQ GLTASVATTY LAGCSNVACA 480 AAQVDDAKKL AASADATVLV MGADQSIEAE SRDRVDVLLP GQQQLLITQV ANVSKGPVIL 540 VIMSGGGMDV SFAKTNDKIT SILWVGYPGE AGGAAIADVI FGYYNPSGRL PMTWYPQAYV 600 DKVPMTNMNM RPDPSSGYPG RTYRFYTGET VYSFGDGLSY SEYKHQLVQA PQLVSIPLED 660 DHVCRSSSKC ISVDAGEQNC QGLAFNIDLK VRNIGKVRGT HTVFLFFTPP SVHNSPQKHL 720 VDFEKVSLDA KTYGMVSFKV DVCKHLSVVD EFGSRKVALG GHVLHVGNLE HSLTVRI 780 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-54 | 411 | 641 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 8.0e-58 | 91 | 475 | 391 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-62 | 75 | 366 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-72 | 42 | 742 | 787 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 35 | 777 | 762 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 1.4013e-45 | 125 | 740 | 91 | 696 | A Chain A, Crystal Structure Of An S. Thermophilus Nfeob E66a Mutant Bound To Gmppnp |
PDB | 3u48_A | 1.4013e-45 | 125 | 740 | 91 | 696 | A Chain A, Crystal Structure Of An S. Thermophilus Nfeob E66a Mutant Bound To Gmppnp |
PDB | 3u4a_B | 5.60519e-45 | 125 | 740 | 91 | 696 | A Chain A, Crystal Structure Of An S. Thermophilus Nfeob E66a Mutant Bound To Gmppnp |
PDB | 3u4a_A | 5.60519e-45 | 125 | 740 | 91 | 696 | A Chain A, Crystal Structure Of An S. Thermophilus Nfeob E66a Mutant Bound To Gmppnp |
PDB | 1j8v_A | 4e-37 | 63 | 614 | 12 | 589 | A Chain A, Crystal Structure Of An S. Thermophilus Nfeob E66a Mutant Bound To Gmppnp |