| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 313077 |
| Family | AA1 |
| Protein Properties | Length: 544 Molecular Weight: 60561.8 Isoelectric Point: 9.0389 |
| Chromosome | Chromosome/Scaffold: 1 Start: 9466460 End: 9469223 |
| Description | SKU5 similar 8 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 46 | 496 | 0 |
| AQQGILINGKFPGPDIVSVTNDNLIINVFNHLDESFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYVLQVKDQIGSFYYFPSLGFHKAAGGFGAIRI SSRPKIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDNGGKLPLPDGILINGRGSGATLNIEPGKTYRLRISNVGLQNSLNFQIQNHMMKLVEVEGTHTI QTPFSTLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILITTGVLHYSNSAGPVSGPIPDGPTQLPWSFDQARAIKTNLTASGPRPNPQGSYHYGKIN ITRTIRLANSAGNIKGKQRYAVNSASFYPADTPLKLADYFKIAGVYNPGSIPDQSTYGAIFPVTSVMQTDYKTFVEIVFENWEDIVQTWHLDGYSFYVVG MELGKWSAASRKVYNLNDAVSRCTVQVYPKSWTAIYVSLDNVGMWNLRSEL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 544 Download |
| MEVKSVNTTA MILGLLFLIS FVAAEDPYRF FEWHVTYGNI SPLNVAQQGI LINGKFPGPD 60 IVSVTNDNLI INVFNHLDES FLISWSGIRN WRNSYQDGVY GTTCPIPPGK NYTYVLQVKD 120 QIGSFYYFPS LGFHKAAGGF GAIRISSRPK IPVPFPAPAD DYTVLIGDWY KTNHKDLRAQ 180 LDNGGKLPLP DGILINGRGS GATLNIEPGK TYRLRISNVG LQNSLNFQIQ NHMMKLVEVE 240 GTHTIQTPFS TLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITTG VLHYSNSAGP 300 VSGPIPDGPT QLPWSFDQAR AIKTNLTASG PRPNPQGSYH YGKINITRTI RLANSAGNIK 360 GKQRYAVNSA SFYPADTPLK LADYFKIAGV YNPGSIPDQS TYGAIFPVTS VMQTDYKTFV 420 EIVFENWEDI VQTWHLDGYS FYVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPKSWTAI 480 YVSLDNVGMW NLRSELWERQ YLGQQFYMRV YTTSTSLRDE YLIPKNALLC GRATGHHTTA 540 PLQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 1 | 543 | 543 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 18 | 539 | 530 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 12 | 538 | 528 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 10 | 535 | 539 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 15 | 532 | 536 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL09733.1 | 0 | 10 | 542 | 10 | 541 | At1g76160/T23E18_10 [Arabidopsis thaliana] |
| GenBank | AAM97070.1 | 0 | 10 | 538 | 10 | 538 | pectinesterase, putative [Arabidopsis thaliana] |
| RefSeq | NP_173603.1 | 0 | 1 | 541 | 1 | 541 | sks8 (SKU5 Similar 8); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_173604.1 | 0 | 1 | 537 | 1 | 537 | sks7 (SKU5 Similar 7); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_177743.1 | 0 | 10 | 542 | 10 | 541 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 29 | 531 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1asq_A | 0 | 29 | 531 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1asp_B | 0 | 29 | 531 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1asp_A | 0 | 29 | 531 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1aso_B | 0 | 29 | 531 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
